Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0373 ATGTTTCTTGTTTTAACTGCAGCTCCAAAGCATAGGCGTTGGGTTTTAAAGCTGGCACTGAGACTTGGGCTAGGCTTAGGTATTGGACTTTTAGGCATTCTTATAATTTGGAGGCTACTTAGATGGCATTACAAACGAAAATATGCTTCAAACGTTCAATTGCTGTCAACAAATAATAATGCAATTGTTCCCTACTCAAATGCAGACCCAGAAAGTGGCAGAGCCTACTTTGGGGTGCCCCTCTTCTCTTACGAAGAGCTTGAAAAAGTAACAAATAATTTTGACTGTTCAAGAGAACTTGGAAATGGAGGCTTTGGGACTGTGTATTATGGAAAACTCCTAGATGGACGAGAAGTTGCTGTTAAGCGCCTATATGACCATAGTTACAGGCGAGTAGAACAGTTCATGAATGAAATTGAGATCCTCACTCGCTTGCGCCATAGAAACCTTGACAAGGAATTGAGACCTTCTATGGATGAGGTTCTAGAGATGCTGAGGAGAATTGAGAGTGGGAAGGAGGAGCTTGCTCATTTAGAGGAAGTAGATATCCAAGCCGCAAAGCACAGGCATTGGATTTTAAAGCTGGCATGGGGACTTGGGCTAGGCTTGGGCATTGGACTTCTAGGCATTCTTATAATTTGGAGGCTACATAGGCTTCATGACAGACGAAAATATGCTTCAAAAGTTCAATTGCAGTCAACAAACAATAATGCAATTGATCTCTACTCAAATGCAGACCCAGAAAGTGGCAGAGTCTACTTTGGGGTATCCCTCTTCTCTTACGAAGAGCTTGAAAAAGCAACAAATAATTTTGACCATTCAAGAGAACTTGGAAATGGAGGCTTTGGGACTGTTTATTATGGAATACTCCAAGATGGTCGAGAAGTTGCTGTTAAGCGCCTATATGACCACAGTTACAGGCGAGTAGAACAATACATGAATGAAATTGAGATCCTTACTCACTTGCGCCAAAGAAACCTTGTGTCCCTCTATGGCTGCACTTCGCGCCACAGCCGCGAACTACTACTTGTAATTGAGAGTGGGAAGAAGCAGCTTGAGCATCTAGAGGAAGTAGATATCCATCCACCATCACCACCATCACCAGATTGCGATGAGAATGAATTGTTGAAGAATATAAGGTTACTGCCTTCACCAAGAGCCGTGATTGATAAATGGAATCGGGAGTCAACTATACCAAGTGCTAGTGCTTAA 1212 0.4249 MFLVLTAAPKHRRWVLKLALRLGLGLGIGLLGILIIWRLLRWHYKRKYASNVQLLSTNNNAIVPYSNADPESGRAYFGVPLFSYEELEKVTNNFDCSRELGNGGFGTVYYGKLLDGREVAVKRLYDHSYRRVEQFMNEIEILTRLRHRNLDKELRPSMDEVLEMLRRIESGKEELAHLEEVDIQAAKHRHWILKLAWGLGLGLGIGLLGILIIWRLHRLHDRRKYASKVQLQSTNNNAIDLYSNADPESGRVYFGVSLFSYEELEKATNNFDHSRELGNGGFGTVYYGILQDGREVAVKRLYDHSYRRVEQYMNEIEILTHLRQRNLVSLYGCTSRHSRELLLVIESGKKQLEHLEEVDIHPPSPPSPDCDENELLKNIRLLPSPRAVIDKWNRESTIPSASA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0373 403 ProSitePatterns Protein kinases ATP-binding region signature. 277 299 IPR017441 GO:0005524
Glsi05g0373 403 Pfam Protein kinase domain 273 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0373 403 SUPERFAMILY Protein kinase-like (PK-like) 249 347 IPR011009 -
Glsi05g0373 403 SUPERFAMILY Protein kinase-like (PK-like) 75 151 IPR011009 -
Glsi05g0373 403 Pfam Protein tyrosine and serine/threonine kinase 96 150 IPR001245 GO:0004672|GO:0006468
Glsi05g0373 403 Gene3D Phosphorylase Kinase; domain 1 68 159 - -
Glsi05g0373 403 Gene3D Phosphorylase Kinase; domain 1 244 346 - -
Glsi05g0373 403 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 204 346 IPR044652 GO:0004672
Glsi05g0373 403 ProSiteProfiles Protein kinase domain profile. 271 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0373 Glsi-ChrGlsi05 52308601 52316726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0373 199 346 Receptor kinase-like Gene Family AT1G25390 55.921 1.07e-42 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi05g0373 Pkinase 4.8e-11 CL0016