Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0372 ATGGCTGCCAAGCATAGGCGTTGGGTTTTAAAGCTGGCACTGGGACTTGGGCTAGGCTTGGGCATTGGACTTCTAGGCATTCTTATAATTTGGAGGCTACTTAGGCTACATTACAGACGAAAATATGCTTCAAAAGTTCAATTGCAGTCAACAAACAATAATGCAATTGATCCCTACTCAAATGCAGACCCAGAAAGTGGCAGAGCCTACTTTGGGGTACCCCTCTTCTCTTACGAAGAGCTTGAAAAAGCAACAAATAATTTTGACCATTCAAGAGAACTTGGAAATGGAGGCTTTGGGACTGTTTACTATGGAAAACTCCAAGATGGACGAGAAGTTGCTGTTAAGCGCCTATATGATCACAATTACAAACGAGTAGAACAGTTCATGAATGAACTTGAGATTCTCACTCGCTTGCGCCATAGAAACCTTGTGTCCCTCTATGGTTGCACTTCACGCCATAGCCGTGAACTACTGCTTGTGTATGAGTACGCTCCAAATAGAACGGACAAAGAATTGAGACCTTCCATGAATGAGGTTCTAGAGATGCTGAGGAGAATTGAGAGTGGGAAAGAGGAAGTAGAAATCCAAGGTGCTGGGATATTACACAGTGGTCCTATGCATACACCATCACCACCTTCTCCAGATTACGATGAAATTGGATTGTTGAAAAATATCAAGTCACCGCCTTCACCAAGAGCCGTGACTGATAAATGGGATAGTGAATTGACTACACCTAATGCCAGTGCTTAA 753 0.4316 MAAKHRRWVLKLALGLGLGLGIGLLGILIIWRLLRLHYRRKYASKVQLQSTNNNAIDPYSNADPESGRAYFGVPLFSYEELEKATNNFDHSRELGNGGFGTVYYGKLQDGREVAVKRLYDHNYKRVEQFMNELEILTRLRHRNLVSLYGCTSRHSRELLLVYEYAPNRTDKELRPSMNEVLEMLRRIESGKEEVEIQGAGILHSGPMHTPSPPSPDYDEIGLLKNIKSPPSPRAVTDKWDSELTTPNASA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0372 250 MobiDBLite consensus disorder prediction 202 250 - -
Glsi05g0372 250 Pfam Protein tyrosine and serine/threonine kinase 91 167 IPR001245 GO:0004672|GO:0006468
Glsi05g0372 250 SUPERFAMILY Protein kinase-like (PK-like) 66 168 IPR011009 -
Glsi05g0372 250 ProSiteProfiles Protein kinase domain profile. 88 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0372 250 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 60 164 - -
Glsi05g0372 250 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 169 245 IPR044652 GO:0004672
Glsi05g0372 250 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Glsi05g0372 250 Gene3D Phosphorylase Kinase; domain 1 61 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0372 Glsi-ChrGlsi05 52299044 52304117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0372 168 250 Receptor kinase-like Gene Family AT1G25390 37.349 7.07e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi05g0372 PK_Tyr_Ser-Thr 1.5e-14 CL0016