Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0369 ATGAACCAAACAAACTCCTTTTTCTGCACCCTCAAATCTCTCTGTTCTCCATTGATACTCTCATACTTCCTCTCCTTCTCTCTCCTAACCAGAATCACCTTGTGCTCTGTGAACCCCAAGTTCGAAGCCTGTCAGCCCAAAACCTGTGGCAATAGCCATACCATAAGCTACCCGTTCTATATCGAAAATAAACAAGAACCTTTTTGTGGGTTTCCCGGTTTCGGCCTCTCTTGTGAAAATGGCTTCCCTATGCTCAATCTGTCCCATACCTTTTACATCGTCCAGGAAATTTTCTACACTAATCAATCTCTTCGAGTTTCCAACCCTGCGTTTTCAATTTTTAACTCCAGAAATTGTTTCTCTCCCCTCCATAACCTCACCCTTTATGGTAACAAGTTTGATTTCGCTCGGAACCAGACAGAATTGTTCTTGTTTTTCAACTGTTCCCTGCCAGAAGGGGTTGAAGAGTACAGAATAGGGTGTTCTGCACGAAAAACGAGCTCTGTTTTGCCTATGGATAACGAGGATGAAAAGTTGACGGATGCGTGGAAGAACTGCACGGGAGGGATGGTGAAGACGATGGTGGAAGAAGGGTATCGGGGTAGGGGAGAAGGGATTGGAGAGGCACTGAGAAGAGGGTTCGTGCTGAATTGGACAGTGACTAACTGCAGCCAGTGTGAGAGGAGTGGAGGGAAGTGTGGGTTCGATAAGGAAACATATAGTTTCAGGTGCTTCTGCCGTGATAGAGATCATCTTTGGAAGTGTCATTCTGGGACCAAGTTTTTGAAGCTGGGACTGGGACTAGGTTTAGGAGTTGGATTCCCAGGTTTCGTAATAATTGGGATCGTTCTATGGTTCTACAAACGAAAATATGCTCATTCAGATTTTCGATTCCAATCAAGAAACGCACCCCATTCAAATTTGGACCTAGAGGGTAGCAATGTGTACTATGGCGTCCCAGTTTTCTCCTATAGGGAACTTGAAGCAGCAACAAACAGTTTTGACCATACCAGAGAACTTGGAGATGGGGGCTTTGGCACTGTTTACTATGGAAAACTCCGAGATGGACGAGAAGTTGCAGTGAAGCGCCTCTACGAGCAAAACTATAGGCGAGTACAGCAGTTCATGAACGAAGTGAAGATCCTCACTCGCTTGCGCCACAGGAACCTTGTGTCCCTCTATGGCTGCACTTCGCGACACAGCCGCGAACTTCTGCTTGTGTACGAATACATTCCAAACGGCACTGTCGCTTATCATCTCCATCTCCATGCTGACTCAACAAAACCAAACTTGTTGCCATGGATTGAAAGTGGGAAGGTTGAACCAGAGCAATTAGAGGAAGAGGGCGATGATGGTGGTGGTGGGGTTTCAGAAAGTGACGTACATCGTCATCGACCTCCATTGCCGGTGCCAACCTCGCCGAACTGGGATGAGGTTGGATTGTTGAAGAATATGACGATGCCACCACCTTCTCCAAACAATGTGACTGATAAATGGGAAAGTAAATCTACGACGCCGGATATCAGTGTTTAA 1533 0.4625 MNQTNSFFCTLKSLCSPLILSYFLSFSLLTRITLCSVNPKFEACQPKTCGNSHTISYPFYIENKQEPFCGFPGFGLSCENGFPMLNLSHTFYIVQEIFYTNQSLRVSNPAFSIFNSRNCFSPLHNLTLYGNKFDFARNQTELFLFFNCSLPEGVEEYRIGCSARKTSSVLPMDNEDEKLTDAWKNCTGGMVKTMVEEGYRGRGEGIGEALRRGFVLNWTVTNCSQCERSGGKCGFDKETYSFRCFCRDRDHLWKCHSGTKFLKLGLGLGLGVGFPGFVIIGIVLWFYKRKYAHSDFRFQSRNAPHSNLDLEGSNVYYGVPVFSYRELEAATNSFDHTRELGDGGFGTVYYGKLRDGREVAVKRLYEQNYRRVQQFMNEVKILTRLRHRNLVSLYGCTSRHSRELLLVYEYIPNGTVAYHLHLHADSTKPNLLPWIESGKVEPEQLEEEGDDGGGGVSESDVHRHRPPLPVPTSPNWDEVGLLKNMTMPPPSPNNVTDKWESKSTTPDISV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0369 510 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 306 410 - -
Glsi05g0369 510 Gene3D Phosphorylase Kinase; domain 1 309 410 - -
Glsi05g0369 510 SUPERFAMILY Protein kinase-like (PK-like) 316 425 IPR011009 -
Glsi05g0369 510 Pfam Wall-associated receptor kinase C-terminal 163 248 IPR032872 -
Glsi05g0369 510 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Glsi05g0369 510 Pfam Protein tyrosine and serine/threonine kinase 337 424 IPR001245 GO:0004672|GO:0006468
Glsi05g0369 510 MobiDBLite consensus disorder prediction 487 510 - -
Glsi05g0369 510 ProSiteProfiles Protein kinase domain profile. 334 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0369 510 Pfam Wall-associated receptor kinase galacturonan-binding 44 107 IPR025287 GO:0030247
Glsi05g0369 510 MobiDBLite consensus disorder prediction 443 510 - -
Glsi05g0369 510 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 20 434 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0369 Glsi-ChrGlsi05 52278714 52284822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0369 462 510 Receptor kinase-like Gene Family AT1G25390 51.020 9.48e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi05g0369 PK_Tyr_Ser-Thr 1.4e-16 CL0016