Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0360 ATGTTTCCTTTTGTTTTGTTGCTTTCTCTGCTGAGCAGTTTTCTTCTTGTACCTGTGAATTCTCTGAACTCTGAAGGCTTTGCTCTTTTGTCGCTGAAGCAGTCCATCACAGACCCAGCTGGGTCTTTGAGAAACTGGAATTCTTCTGATGAAAATCCCTGTTCGTGGACTGGGATAGCATGCAACAATGCACAAAGAGTTGTTTCTATAAGTTTTCCCAAGAGTGAGCTTTCTGGGTTTCTTCCCTCTTCCTTAGGTTCTCTTTCTCAGCTCCGCCATGTGAATTTTAGAGGCAATAAGCTCTTTGGGAGCTTGCCCTCAGAGCTCTTTCTAGTGCAGGGACTGCAAAGTTTGGTCCTTTCTGGCAATTCCTTTTCTGGGTCTGTTCCAAATGGGATTGGGAAGCTTAGATACCTTCAGACTTTAGATTTATCCCAAAATTTCTTCGCTGGGTCATTACCTGCTACAATTGTCTTCTGCAAGAGACTTAAATTCCTTGATCTCAGCCATAACAATTTCACCTTTCCTCTACCCAGAGGATTTGGTTCTAATTTCTTGTCTCTGGAAATTCTGAACCTGTCTTTCAATCACTTCAATGGTTCAATTCCTAGTGACATAGGAAATCTATCAAACCTTCAAGGAACTGTTGATTTATCAAATAACCATTTTAGCGGTTCAATCCCAGCCAGTCTTGGAAATTTGCCTGAAAAGGTTTATATTGATCTTACTTTCAACGATTTAAGTGGTCCAATACCCCAAAATGGTGCTTTAATGAACAGAGGACCAACAGCTTTTATAGGCAATCCTGGTCTTTGTGGCCCTCCTTTGAAGAATCCATGCTCCTCAGATAGTGCTAGTTCACCTTCTTCGTTACCATTTCTTCCAGATAACTATCCATCTCAGGATACTGATAATGGTTCTGGGAAAAGTGAGAAAACCAAAGGGCTAAGTAAGAATACTGTTATCGGCATTGTTGTGGGTGATATAATTGGGATTTGCCTTTTGGGTTTGCTGTTCTCTTGCTGCTATTATAGGTTCTGTGGTTCTGATCAGAAGAAAGATGAAAATGGTTTTGAGAAGGGAGGGAAAGGGAGGAGGTTTGAGTGTTTCTGCTTGAGAAAGGATGAATCTGGGACCCTATCTGAGAATGTTGAGCACAATCTCGTCCGTTTAGATGCCCAAGTGGGCTTTGATTTGGATGAGCTTCTTAAAGCTTCTGCTTTTGTTCTGGGAAAAAGTGGGATAGGGATTGTCTACAAAGTGGTGCTTGAAGATGGGCTAATCTTGGCAGTGAGAAGATTGGGGGAAGGGGGTTCTCAAAGGTTTAAAGAATTCCAGACTGAAATAGAAGCCATAGGAAAATTGAGGCATCCTAATGTTGTCACTCTCAAAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATCTATGATTATCTACCCAATGGAAGCCTTGCTTCAGCAATTCATGGGAAGGCTGGATTTGTCACATTTACACCTCTATCATGGTCCATAAGGTTAAAAATCATGAAAGGAACTGCAAAAGGCTTGGTCTACCTGCATGAGTTTAGCCCCAAAAAATATGTCCATGGAGACCTGAAGCCAAGTAACATACTTCTTGGGCACAACATGGAGCCCCAAATTGCTGATTTTGGACTTGGACGACTTGCAAATATTGCTGGAGGAGGGTCCCCAACCCTAACCTTGCAATCCAACCGAGTTGCAGCCGAGAAACCCCAAGAAAGACAGAAGAGCTTGTCCTCCTCTGAAGTTACAACCTTAGGAAATGGTTATCAGGCTCCAGAAGCATTGAAAGTGGTGAAGCCATCCCAGAAGTGGGATGTTTATTCATTTGGTGTGATTTTGCTTGAAATGATCACGGGAAGATTGCCCATTTTTCAAGTGGGTAACTCAGAAATGGACCTTGTTCAGTGGATTCAGTTCTGCATTGAGGAGAAGAAGCCACTCTCAGATGTTTTGGACCCTTATTTGATTGAAGATGCAGATAAGGAAGAGGAGATTATTGCAGTACTGAAGATTGCAATGGCTTGTGTCCACAGCAGCCCCGAAAAGAGACCAACGATGAGGCATTTACTTGATGCTTTGGATAAGTTGTCTGTTTCCTCCGATTGA 2133 0.4248 MFPFVLLLSLLSSFLLVPVNSLNSEGFALLSLKQSITDPAGSLRNWNSSDENPCSWTGIACNNAQRVVSISFPKSELSGFLPSSLGSLSQLRHVNFRGNKLFGSLPSELFLVQGLQSLVLSGNSFSGSVPNGIGKLRYLQTLDLSQNFFAGSLPATIVFCKRLKFLDLSHNNFTFPLPRGFGSNFLSLEILNLSFNHFNGSIPSDIGNLSNLQGTVDLSNNHFSGSIPASLGNLPEKVYIDLTFNDLSGPIPQNGALMNRGPTAFIGNPGLCGPPLKNPCSSDSASSPSSLPFLPDNYPSQDTDNGSGKSEKTKGLSKNTVIGIVVGDIIGICLLGLLFSCCYYRFCGSDQKKDENGFEKGGKGRRFECFCLRKDESGTLSENVEHNLVRLDAQVGFDLDELLKASAFVLGKSGIGIVYKVVLEDGLILAVRRLGEGGSQRFKEFQTEIEAIGKLRHPNVVTLKAYYWSVDEKLLIYDYLPNGSLASAIHGKAGFVTFTPLSWSIRLKIMKGTAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPQIADFGLGRLANIAGGGSPTLTLQSNRVAAEKPQERQKSLSSSEVTTLGNGYQAPEALKVVKPSQKWDVYSFGVILLEMITGRLPIFQVGNSEMDLVQWIQFCIEEKKPLSDVLDPYLIEDADKEEEIIAVLKIAMACVHSSPEKRPTMRHLLDALDKLSVSSD 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0360 710 CDD STKc_IRAK 410 705 - -
Glsi05g0360 710 Pfam Protein kinase domain 410 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0360 710 SMART serkin_6 409 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0360 710 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Glsi05g0360 710 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 160 706 IPR046959 -
Glsi05g0360 710 MobiDBLite consensus disorder prediction 278 314 - -
Glsi05g0360 710 MobiDBLite consensus disorder prediction 279 314 - -
Glsi05g0360 710 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Glsi05g0360 710 FunFam Leucine-rich repeat receptor-like protein kinase 387 479 - -
Glsi05g0360 710 FunFam Leucine-rich repeat receptor-like protein kinase 22 179 - -
Glsi05g0360 710 FunFam Leucine-rich repeat receptor-like protein kinase 187 282 - -
Glsi05g0360 710 SUPERFAMILY L domain-like 23 277 - -
Glsi05g0360 710 Gene3D Transferase(Phosphotransferase) domain 1 480 710 - -
Glsi05g0360 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Glsi05g0360 710 Gene3D Phosphorylase Kinase; domain 1 374 479 - -
Glsi05g0360 710 FunFam Leucine-rich repeat protein kinase family protein 480 708 - -
Glsi05g0360 710 SUPERFAMILY Protein kinase-like (PK-like) 409 702 IPR011009 -
Glsi05g0360 710 ProSiteProfiles Protein kinase domain profile. 404 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0360 710 Gene3D Ribonuclease Inhibitor 18 77 IPR032675 -
Glsi05g0360 710 Gene3D Ribonuclease Inhibitor 78 287 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0360 Glsi-ChrGlsi05 52162975 52165390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0360 4 710 Receptor kinase-like Gene Family AT2G01210 66.156 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi05g0360 Pkinase 9.7e-35 CL0016