Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0355 ATGGAGGCGCCTCCTCCACCTCCACCCACTGCCCCGCCACTATCCTCTGCGGTGCCGGCACCACCCCCTCATCTTAACTACCCAGACTCTGTGGACTCTTCTCCCCGGTCCCGGAACACGGACTCCTGGGATGATCCTTTCCCTTCGGCCACCGTCTCCTCCAATAAGCTCCGCCTCATGTGCAGCTATGGCGGTCATATTGTCCCCCGTCCTCACGATAAGTCTCTTTGTTACGTCGGTGGAGATACCCGTATCGTCGTTGTTGACCGTAACACCTCTCTCTCCGACCTTTCTTCACGCCTCTCCAAAACATTCCTTAGCGGCCATCCCTTTAGTCTCAAATACCAGCTTCCCAGTGAAGACCTTGATTCCCTTATCTCCGTCACCACCGATGAAGACCTTGATAATATGATCGAAGAGTATGATCGAACTGCGAATTCGTCAGTTAAACCCTCCAGAATCCGACTATTCCTATTCCCGACGAAACCCGATTCGCCGCAATCCATTGGGCCCATCCTTGATAGTTCAGCGAAGTCGGAGGACTGGTTCCTGAACGCGCTCAACAACGCCGGAATGCTCAATAGAGGGTTCTCCGAGTCTGCTTCGGTTAATTGCTTGCTGGGTCTCGATGATGAGGTTGGTGGCAACAATCTGGACTCGGGTTCTAGAGATACTGAGACTGCCCAACCTGGATCTTTTGTGAATTGTAAGAACGTGAAGCAGGGACAGGATGTTCACTCTGTACCCGATTCCCCTATGCTGGAAACTACGTCTTCTTTTGGGTCTACTTCTTCGTCACCTTCACTGGCAAATTTGCCGCCGATTCGGGTTCATGTGGATGATGGCGGTGGTAGCGTTGGTGGGCATAGGATGCAAGATCAGAAGGTGGTGGGGATTGAGGAACAGTTTGCCCAAATGAGTGTTGGTGGTGGGCAGAAGCAAGATGAGGGTTTTGTTGTGCTCTCTTCTCCTCCTCCGATGCCGGCCACCATTTCGGCTGCTCCGGGTGTGACGATCAGCTCTGCAGTAGTTGCTGGCGAATATCAGAATCGGGTTTTCTCTGATGATGAGAGATCAGACCACGGGGTGCCTATGGGTTATAGAAAGCCTCCAGCACCGCAGCCACAGACACAGACACAACCCCAGCCTCAGATTCTGCTTCCCCAATTTCAACAGAAGTCAACCGGCGGCGTTGATTTACCTTCCCCAGATTCAGTTTCAAGTGATAGTAGTATTTCAAACGCAATGTCACGCCCTAAAGCTGTAACCTATCAAGATCAAGTTCAAATTCCCACTGTAACTTCAAGGGTTCCCAGTAATCCTGTTGATCCAAAGTTCAATCTGTCTGATCCTCACAGTCGGATCCAGATGCCGCAACAGGTGCAAGACCCGGGATATGTATTGCAACAACAATTTGATCAACAGCAGCAGCAGCAATATATACATGGCACCCATTTTGTTCACCATACTCCGGCCGGGGCTGTGCCAATCCCTGCATACTACCCTGTATATCCTTCCCAGCAACAGTCCCATCCTCAGCATCATCACCAGCTTGATCAGCAATACCAGGTTTACTACATGCCGGCAAGACCGGCCCAACCTTACAACTTGTCTATGCAGCAACCAAATATTGGTGAACCTGCCACAACCATCCCTTCTAGCCGCCCTCAAACTCCACCAAATCCTTCAATGGCTCCACCATCTGCAGCTTACAATCCCATAAGAAATGTTCCAATGCCTAAATCTGAAATGACAGCAGGCGCATACAGAACAGCAACTGCCGGCACCCCACAATTAGTTCAAGTTCCCTCTAGTCAGCATCAACATCAGCATCAGCATCAGCATCAGCAACAATATATGGCTTACTCCCAGATTCACCATCCGTCTCAGACTGTTGCCCCCAATTCTGCTGCCCCGGCTAATTATGCTTATGACTATGCCGATCCTGCTCATGCTCAAATGTACTACACTCAACCTATGCCCCCTACAATTCCTTCACAGTACCAAACCATGGCATCTTCTGGTGTTGTGCTACCAGAAGTCTCTTCTCAGCTTCCCTCGGACAGTATAAAGCAGCAGCAGATAAGAACCTCTCAGCCAATATAA 2106 0.5043 MEAPPPPPPTAPPLSSAVPAPPPHLNYPDSVDSSPRSRNTDSWDDPFPSATVSSNKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVDRNTSLSDLSSRLSKTFLSGHPFSLKYQLPSEDLDSLISVTTDEDLDNMIEEYDRTANSSVKPSRIRLFLFPTKPDSPQSIGPILDSSAKSEDWFLNALNNAGMLNRGFSESASVNCLLGLDDEVGGNNLDSGSRDTETAQPGSFVNCKNVKQGQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVDDGGGSVGGHRMQDQKVVGIEEQFAQMSVGGGQKQDEGFVVLSSPPPMPATISAAPGVTISSAVVAGEYQNRVFSDDERSDHGVPMGYRKPPAPQPQTQTQPQPQILLPQFQQKSTGGVDLPSPDSVSSDSSISNAMSRPKAVTYQDQVQIPTVTSRVPSNPVDPKFNLSDPHSRIQMPQQVQDPGYVLQQQFDQQQQQQYIHGTHFVHHTPAGAVPIPAYYPVYPSQQQSHPQHHHQLDQQYQVYYMPARPAQPYNLSMQQPNIGEPATTIPSSRPQTPPNPSMAPPSAAYNPIRNVPMPKSEMTAGAYRTATAGTPQLVQVPSSQHQHQHQHQHQQQYMAYSQIHHPSQTVAPNSAAPANYAYDYADPAHAQMYYTQPMPPTIPSQYQTMASSGVVLPEVSSQLPSDSIKQQQIRTSQPI 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0355 701 Gene3D - 76 160 - -
Glsi05g0355 701 MobiDBLite consensus disorder prediction 352 381 - -
Glsi05g0355 701 MobiDBLite consensus disorder prediction 1 49 - -
Glsi05g0355 701 SMART PB1_new 71 161 IPR000270 GO:0005515
Glsi05g0355 701 MobiDBLite consensus disorder prediction 241 272 - -
Glsi05g0355 701 SUPERFAMILY CAD & PB1 domains 72 169 - -
Glsi05g0355 701 MobiDBLite consensus disorder prediction 30 49 - -
Glsi05g0355 701 CDD PB1_UP2 60 159 - -
Glsi05g0355 701 MobiDBLite consensus disorder prediction 393 424 - -
Glsi05g0355 701 Pfam PB1 domain 72 160 IPR000270 GO:0005515
Glsi05g0355 701 MobiDBLite consensus disorder prediction 553 567 - -
Glsi05g0355 701 MobiDBLite consensus disorder prediction 542 569 - -
Glsi05g0355 701 ProSiteProfiles PB1 domain profile. 56 161 IPR000270 GO:0005515
Glsi05g0355 701 MobiDBLite consensus disorder prediction 1 28 - -
Glsi05g0355 701 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 76 161 - -
Glsi05g0355 701 MobiDBLite consensus disorder prediction 241 271 - -
Glsi05g0355 701 PANTHER OS05G0427100 PROTEIN-RELATED 26 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0355 Glsi-ChrGlsi05 52024602 52026846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0355 56 159 MAP Kinase Kinase Kinase AT3G46920 46.667 9.65e-26 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0355 05 52024602 52026846 Glsi05g0355 05 52024602 52026846 ECH