Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0347 ATGGAAGATCCTGTCTTTGCAAGAGGTATTGACATTCTGTTGGTACATAATGATACATTGTATCTTGGGTACCTAACGTCGTTGCTTCGGCAATCCTCATTCAAAGTTACTGCTACTAATCAAGCATCAGCAGCTATTGACATGATTGGTGAACAAGAAGGCAGGTTCAAACTTGCCATAGCTAAAGCAAACTTGCCTGACATGAGCACCCTTTCTTTCCTGCACAAATTTATTGAAAAGGAAATCCCTGTCATTTTTATCTCCTCTGGAGAAAATGATGGTGTAGCAATGGCAGCATTTGCTAGAGGATTATGTTATTTCCTTAAGGAACCAATCCAAGCAGATTATCTCAAATATGTGTGCCAACATGTGTATCACACAAAAAACAACTTGGCAGAAGAGATTCAAAATGTAAAATGTAAAGGGAAGGTTGATCGAGCAAGTCAAAATCAAAGAAGGACTCGTGACGATGCTGAAGACAAGCAAAAAGGGAAGAGAGTTAAACTTGGCTCTGACAAGATGAAATTTGGCAGCAATCATCATACTGCAAAGGAAGAAAGAGAACAAAACAAGGGATCCACTGGGAAAAAGCCACGTGTTGTTTGGACTCCTGAGCTGCATCTTAAGTTTGTAGAAGCCTTAAGTGTGCTGGGCGATAAGAGTACTACTACACTCTCTCCAATCGTATATTGA 693 0.4012 MEDPVFARGIDILLVHNDTLYLGYLTSLLRQSSFKVTATNQASAAIDMIGEQEGRFKLAIAKANLPDMSTLSFLHKFIEKEIPVIFISSGENDGVAMAAFARGLCYFLKEPIQADYLKYVCQHVYHTKNNLAEEIQNVKCKGKVDRASQNQRRTRDDAEDKQKGKRVKLGSDKMKFGSNHHTAKEEREQNKGSTGKKPRVVWTPELHLKFVEALSVLGDKSTTTLSPIVY 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0347 230 SMART REC_2 10 121 IPR001789 GO:0000160
Glsi05g0347 230 Pfam Response regulator receiver domain 12 118 IPR001789 GO:0000160
Glsi05g0347 230 MobiDBLite consensus disorder prediction 142 194 - -
Glsi05g0347 230 Gene3D - 194 227 - -
Glsi05g0347 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 215 IPR045279 GO:0009736
Glsi05g0347 230 ProSiteProfiles Response regulatory domain profile. 11 125 IPR001789 GO:0000160
Glsi05g0347 230 Gene3D - 10 148 - -
Glsi05g0347 230 SUPERFAMILY CheY-like 9 133 IPR011006 -
Glsi05g0347 230 MobiDBLite consensus disorder prediction 142 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0347 Glsi-ChrGlsi05 51794624 51798054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0347 6 218 Response Regulator Gene Family AT2G25180 31.674 4.86e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi05g0347 Response_reg 7e-09 CL0304