Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0284 ATGGCGCAACCGAGGGCCGTGAAGGTCCTTGAAGTTAGCCGAGTGGCACCGCCGCCGGGAACAACCGCTGCAACCTCTCTACCCCTCACCTTCTACGATATACTATGGCTGAGATTCCAACCCGTTGAGCGTCTTTTCTTTTATGAATTCTCCCAACCAACGTCATCTTTCTTGGATTCTGTTCTTCCAAAACTCAAACACACTCTCTCTCTGACTCTTCAGAACTTCCTTCCTCTTGCCGGAAACCTCACTTGGCCCCTTCACTCCCCCAAACCCTTCATTCAGTATCTCCCTGGCGATGCGGTCTCCCTCACCATAGCAGAGACCGACGCAGATTTCTATCGTCTTTCAGGTACAGATCCCGCTGATGTCGTGGAATGCCACCCGCTCATACCCCACTTGACCATTTCCCATGAACAAGCTTCTACCATGGCCCTGCAAGTCACTATGTTTCCAAACTCAGGGTTTTGCATAGGAATCGCCACACACCATGCAGCTGTGGATGGAAAATCATCTATTTCGTTTATGAAATCATGGGCTTATACCTGCTCTAACCTCGAACTAGCACCATCTTCATCTTTACCAGAGCATCTAACACCATTCTATGACAGGTCCGTGATCAAAGACCCAATTGGAATCTCCGAAATATTTGTGAATGCTTGGTTAAACCAGGGTGGACCAAACAACCGAAGCTTAATGGTGTGGGAGTTATATAAAACAACTCAAAAGATGTTAAGGGGGACGTTTGAATTGACCCCTTCTCATATCCAAAAGCTTAAGCAATCTGCAGAATCCAATCTGAACAAAAAGGTTCGCCTATCAACGTTTTCAGTAACATGTGCTTATGTTCTGGAATGCTTAGTCAAAGCAGAACGAACAGAGGCCAAAAAAGTGCTTTTCCTTTTCAGTGTGGATTGCAGGTCTCGTTTGGATCCTCCAATTCCACCCACTTACTTTGGGAACTGCATTGCGGGAGCGAGGGTTGTGGCTGAGACAGAGAGATTGATGGGGAAAGATGGTTTCGTCATTACCCTTGATGCCATCAGTGAAGCTTTGAATAGATTAGAAGACCATGGAGTGCTAAATGGAGCAGAAAGTTGGGCTGCAGATATGGAAAATGCAACGAAGGACAAAAGTCAAAGAGTCTTCTCCACTACTGGGTCACCTCGGCTAGAGGTTTATAGTGTAGATTTTGGGTGGGGAAGGCCCAAGAAGGTGGAGGTGGTTTCTATAGAGAGGACAGGGGCATTTTCTCTTTCGGAGAGGAGGAATGGCCATGGAGGAATTGAGATTGGGTTGGCGTTGAACAAGCATGCGATGGAGGTTTTTGCTGATCTTTTCCTCAAAGGTCTTGAATCCTCTTGA 1365 0.4681 MAQPRAVKVLEVSRVAPPPGTTAATSLPLTFYDILWLRFQPVERLFFYEFSQPTSSFLDSVLPKLKHTLSLTLQNFLPLAGNLTWPLHSPKPFIQYLPGDAVSLTIAETDADFYRLSGTDPADVVECHPLIPHLTISHEQASTMALQVTMFPNSGFCIGIATHHAAVDGKSSISFMKSWAYTCSNLELAPSSSLPEHLTPFYDRSVIKDPIGISEIFVNAWLNQGGPNNRSLMVWELYKTTQKMLRGTFELTPSHIQKLKQSAESNLNKKVRLSTFSVTCAYVLECLVKAERTEAKKVLFLFSVDCRSRLDPPIPPTYFGNCIAGARVVAETERLMGKDGFVITLDAISEALNRLEDHGVLNGAESWAADMENATKDKSQRVFSTTGSPRLEVYSVDFGWGRPKKVEVVSIERTGAFSLSERRNGHGGIEIGLALNKHAMEVFADLFLKGLESS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0284 454 Gene3D - 240 453 IPR023213 -
Glsi05g0284 454 PANTHER - 7 453 - -
Glsi05g0284 454 Pfam Transferase family 12 445 - -
Glsi05g0284 454 SUPERFAMILY CoA-dependent acyltransferases 248 453 - -
Glsi05g0284 454 Gene3D - 6 231 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0284 Glsi-ChrGlsi05 49777854 49780748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0284 13 449 Monolignol Biosynthesis Gene Families AT5G48930 25.107 1.26e-20 92.0