Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0274 ATGGGAGATGGCAAGAAAAGGTCGTCATCATCTTATTATAGCATTCTTGGTGTTAGTTCGGATTCTTCCATAGAAGAAATAAGGCGTGCTTATCACAAGCTAGCTATGCAATGGCATCCTGATAGGTGGACAAGAACGCCTTCTTTACTGGGTGAAGCCAAACAGAGATTTCAGCAAATTCAAGAAGCATATTCAGTATTATCAGACCACAAGAAAAGGACGATGTACGATGCAGGCTTGTATGACCCTGAAGACGAAGAGGATGAGGGGTTTTCTGATTTTGTGGAAGAAATGGTGTCCCTAATGGCTCAAGTGAGGAGGGAGGAAAAAGTTTACAGTATGCAAGAGTTGCAGACTATGTTCACGGACATGGCTCGTGAATTTGAGTCAACCTCATGGTATTGCGGACCCTCGGTTCTTGATGAGACCCAATGCTCGAAGAGGCTGCGTTTGGACACAACCCTGATGGACAATGGCGGCTCACATTTTCATGTGCCTGGCCTTAAATTGGAATTGAGGAAAGGATTAACTGTGCACTCTCTTCTTTGTGTGAACTTGACAAAGATGACAGAATTGGGTTGTGGATTCACAGATCGATGCATACAAGTTAGATTATTGAATGCACTTGCTTGCAATGATGTTTATTTCCCATTTGCTGATTTGGTTCAATATACACAATTTGGTGCTCTACATTTGGGCCTGATCGTGGCTGGTATCTTTTTGCTACCTCTGTTTGCTATTGGCCTTGTTCACCAACATTAG 762 0.4304 MGDGKKRSSSSYYSILGVSSDSSIEEIRRAYHKLAMQWHPDRWTRTPSLLGEAKQRFQQIQEAYSVLSDHKKRTMYDAGLYDPEDEEDEGFSDFVEEMVSLMAQVRREEKVYSMQELQTMFTDMAREFESTSWYCGPSVLDETQCSKRLRLDTTLMDNGGSHFHVPGLKLELRKGLTVHSLLCVNLTKMTELGCGFTDRCIQVRLLNALACNDVYFPFADLVQYTQFGALHLGLIVAGIFLLPLFAIGLVHQH 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0274 253 Gene3D DnaJ domain 2 99 IPR036869 -
Glsi05g0274 253 SUPERFAMILY Chaperone J-domain 9 83 IPR036869 -
Glsi05g0274 253 SMART dnaj_3 10 72 IPR001623 -
Glsi05g0274 253 ProSiteProfiles dnaJ domain profile. 11 80 IPR001623 -
Glsi05g0274 253 PANTHER PUTATIVE, EXPRESSED-RELATED 1 131 - -
Glsi05g0274 253 CDD DnaJ 15 69 IPR001623 -
Glsi05g0274 253 Pfam DnaJ domain 12 77 IPR001623 -
Glsi05g0274 253 PRINTS DnaJ domain signature 52 72 IPR001623 -
Glsi05g0274 253 PRINTS DnaJ domain signature 13 31 IPR001623 -
Glsi05g0274 253 PRINTS DnaJ domain signature 31 46 IPR001623 -
Glsi05g0274 253 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0274 Glsi-ChrGlsi05 49246380 49249812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0274 12 78 C2H2 Transcription Factor Family AT1G74250 45.588 3.44e-12 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0274 05 49246380 49249812 Glsi05g0274 05 49246380 49249812 ECH