Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0257 ATGGAGTCAACGAGGCCCAACTCCCTCATGCTCCTTCTCCTTCCCCTCCTATTGTTCTGCTTCAGTCACAACCATGTCTCAGCTTCTGCTTCACTATCTGCTTCAAAATCAACCCCTTTGTTTCCAAAAGAAGCCCTACCCACCAAATCTGGGTACCTCCCTCTTAACCACACCTCTGATTCCGCCATTTTCTATGCATTCTACGAAGCCCAGAACTCCACTTCACCTCTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGTTGCTCCTCCATGATTGGCAACTTCTTCGAGCTTGGACCCTGGCGCGTCACCAAATCCCTAACCCTTGAGCCCAACCCTGGTGCTTGGAATAGAATTTTTGGCCTTCTTTTTCTTGATAATCCAATTGGAACTGGATTCAGTGTGGCCTCAAAGCCAGAAGAAATCCCAAGAGATCAAATTTCTGTAGCGAAACACCTTTTTACTGCTATAACCAGGTTTATTCAACTTGACCCAGTTTTCAAGTATCGCCCAATTTACATAACTGGCGAAAGCTATGCTGGGAAGTATGTTCCAGCAATTGGGTATTATATACTGCAGAAAAATGCTCAGTTACAGGTTTCTCAGAGAGTGAATTTGGCAGGTGTGGCAATTGGGGACGGATTGACAGACCCTGTGACCCAGGTGGCCACTCATGCTGTGAATGCTTACTTTGTTGGTTTGATCAATGAAAGGCAGAAGGAGGAGTTGGAGAAGGTTCAGTTGGAAGCAATCAGGTTGACCCAGAAGGGGGATTGGAGCGAAGCAACAGATGCCAGAAACAGAGCCTTGAGATTGTTGCAGAATATGACTGGGTTGGCTACTTTGTATGACTATACAAAGAAAGCTCCTTACCAAGATGATTTAGTCACTGAGTTCTTAAAATCTTCCGAGGTGAAGAAATCATTGGGGGCGAATGAATCGCTTGTGTTTGAAGGATGCAATGATGTTGTAGGGGTCGCATTGAGTGAGGATGTGATGAAGAGTGTGAAATATATGGTGGAGTACTTGGTGAGGAGGAGCAGGGTGCTGTTATACCAAGGCCAGTATGATTTGAGGGATGGGGTGCTTCAAGTTGAGGCTTGGGTGAAGACAATGAAATGGGAAGGGATTGTGAATTATTTGAATGCAGAAAGGAAGATTTGGAAAGTGAACAATGAGCTTGCTGGGTATGTACAAAAATGGGGGAGCCTCACCAATGTTGTGGTTTTGGGGGCTGGGCATCTTTTGCCAGCAGATCAAGCTGTGAATTCTCAAACAATGATAGAAGACTGGGTTTTAGAGAGGGATTTGTTTGAAAATGAGCAACTCCAGGAGAGTTCACCAAGTTTCTAA 1365 0.4557 MESTRPNSLMLLLLPLLLFCFSHNHVSASASLSASKSTPLFPKEALPTKSGYLPLNHTSDSAIFYAFYEAQNSTSPLSQTPLLIWLQGGPGCSSMIGNFFELGPWRVTKSLTLEPNPGAWNRIFGLLFLDNPIGTGFSVASKPEEIPRDQISVAKHLFTAITRFIQLDPVFKYRPIYITGESYAGKYVPAIGYYILQKNAQLQVSQRVNLAGVAIGDGLTDPVTQVATHAVNAYFVGLINERQKEELEKVQLEAIRLTQKGDWSEATDARNRALRLLQNMTGLATLYDYTKKAPYQDDLVTEFLKSSEVKKSLGANESLVFEGCNDVVGVALSEDVMKSVKYMVEYLVRRSRVLLYQGQYDLRDGVLQVEAWVKTMKWEGIVNYLNAERKIWKVNNELAGYVQKWGSLTNVVVLGAGHLLPADQAVNSQTMIEDWVLERDLFENEQLQESSPSF 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0257 454 Gene3D alpha/beta hydrolase 25 450 IPR029058 -
Glsi05g0257 454 SUPERFAMILY alpha/beta-Hydrolases 46 437 IPR029058 -
Glsi05g0257 454 Pfam Serine carboxypeptidase 46 436 IPR001563 GO:0004185|GO:0006508
Glsi05g0257 454 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Glsi05g0257 454 FunFam Carboxypeptidase 32 443 - -
Glsi05g0257 454 Coils Coil 240 260 - -
Glsi05g0257 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Glsi05g0257 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Glsi05g0257 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Glsi05g0257 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 408 421 IPR001563 GO:0004185|GO:0006508
Glsi05g0257 454 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 424 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0257 Glsi-ChrGlsi05 48773933 48775297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0257 324 436 Calmodulin-binding Proteins AT2G22960 25.439 1.38e-08 52.8