Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0253 ATGGCCTTACAGAACATTGGTGCTTCAAATCGTGATGATGCCTTCTATAGGTACAAGATGCCAAAAATGATAACTAAGATTGAAGTTAGAGGAAATGGCACCAGGACTAATGCTATTAACATGGTTGACATTGCAAAGGCCCTGGCTAGACCTACAGTTTACACTACAAAGTATTTTAGTTGTGAGCTTGGAGCTCAATCAAAATTTGATGGAGGGTCACAAATGATTTTGTTGCATGCTTTAAAATCTTTTTGTGGGAAAGAAAGCACAGAGGCAGTGAAGGAGGTTGCATTAGTCTTGAAGGAGCTCTATGACTATGATGTGTTAGTGGAGGAGTATATACTTCAATGGTATGATATTGGCAAGGCTCGGTTAACAGCAACAAGAGTTCACAAATCTGGAAAAATGTTTAACCCTTCATTGAATGGCTTGAAAATCCTGAGTCTGAATCTGAGGAAGAATAAATAG 468 0.3868 MALQNIGASNRDDAFYRYKMPKMITKIEVRGNGTRTNAINMVDIAKALARPTVYTTKYFSCELGAQSKFDGGSQMILLHALKSFCGKESTEAVKEVALVLKELYDYDVLVEEYILQWYDIGKARLTATRVHKSGKMFNPSLNGLKILSLNLRKNK 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0253 155 ProSiteProfiles W2 domain profile. 1 155 IPR003307 GO:0005515
Glsi05g0253 155 Coils Coil 144 155 - -
Glsi05g0253 155 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 72 137 IPR045196 GO:0003743|GO:0006413
Glsi05g0253 155 Pfam eIF4-gamma/eIF5/eIF2-epsilon 74 137 IPR003307 GO:0005515
Glsi05g0253 155 SUPERFAMILY ARM repeat 63 124 IPR016024 -
Glsi05g0253 155 SMART eIF2Bneu4 15 102 IPR002735 GO:0003743|GO:0006413
Glsi05g0253 155 Gene3D - 2 84 - -
Glsi05g0253 155 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 76 IPR016189 GO:0003743|GO:0006413
Glsi05g0253 155 Pfam Domain found in IF2B/IF5 11 79 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0253 Glsi-ChrGlsi05 48592346 48592813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0253 1 70 Eukaryotic Initiation Factors Gene Family AT1G36730 82.857 9.11e-38 132