Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0250 ATGAATTTTCTTCTTCTTCTTATTATTGTAGTTGTCCTTCTCATATACTTGGTGAAAATTTTCCACTCGATTTTCTGGGTCCCATGGAAAACCCATTATCATTTTCACAAGCAGGGGATAGGTGGCCCTGGCTACCGTCCTATCTTTGGAAACTCAGCAGAGATCCGACGCCTGTTTGCAGAATCTCAATCAAAGCCAATCCCTTTTGACCATGATATCCTAAAACGCGTGGTCCCTTTTTACCATATGTGGTCAAGCATGTATGGGAAAACTTTTCTCTACTGGTTTGGGTCAAAGCCACGGTTGGCAATATCCGAGCCAGATATGATTAAGGAGGTATTGATGAATAAGGGTGGGGAATTTGGCAAGGTACCCTATAACCCTCAGTCTAAGCTGCTTTTTGGACAAGGACTTGTGGGCCTGGAGGGTGACAAATGGGCATATCACAGAAGGATCATAAACCAGGCATTTAACATGGAGCTTGTCAAGGGTTGGGTACCAGAAATTGTGGCCAGTGTCACAAAGATGCTGGCCAAATGGGAGGAAGTAAGGGGAGGGAAAGAAGAAATTGAGATGGATGTGCACAAAGAGCTGCATGGTCTTTCTGCAGAAGTTATATCAAGGACTGCTTTTGGCAGCAGTTATGAAAAGGGCAAGCGTATTTTCAACTTACAAGAGCAGCAAATGCATCTTTTCTCGCAAGCAGTGAGAAGTGTCTATATTCCTGGATTTAGATATTTGCCTAGTAAGAAGAACAGAGACAGATGGAGATTAGAGAAAGAAACTCGTGAATCAATTCAGAAGCTGATTGAGGCTAAGAGCAATTTAAGAGGAAATGGAAGAAATCTACTGAGTTCATTGATGCATAGTTACCAGAATGAGGCTGGTGGAGAAGAGAGGTTAGCGGTGGAAGAAATCATTGATGAATGTAAAACCTTCTACTTTGCTGGAAAGGATACAACAGCTAATTTGTTGACTTGGGCACTTCTTCTCTTAGCTAAACATCAGGAATGGCAAAGTAAGGCACGAGAAGAAGTTCTTGCCGTCTTTGGGCACAACCGGTTTCCAGTTGCAGAAAAGTTAAATGATCTTAAGATTATTGGCATGATAATTAATGAAACACTTAGGCTCTACCCTCCTGCTGTGATGCTAATGAGGCAAACATCAGAAAAGGTTATGCTAGGGAGCCTTGATGTTCCTGCCAAGACTCAACTCTACTTGGCATTGACCGCTGTCCATCATGACACAGAAATTTGGGGAAAAGATTGTAACAAGTTCAATCCCATCAGGTTCAGTGAGCCTCGAAAACATTTGGCTGCATTTTTTCCTTTTGGGCTTGGCCCTCGAACCTGTGTTGGTCAAAATTTAGCAATTGTTGAGGCAAAGATTGTTCTTGCTATGATCATTCAACATTTTAACTTTGTGGTATCTCCAACCTATTGTCATTCTCCTATGCTATTTATAACTTTGCAACCACAATATGGTGCTCCAATCCTCTTCAGAAGGATTTCATATTGA 1518 0.4183 MNFLLLLIIVVVLLIYLVKIFHSIFWVPWKTHYHFHKQGIGGPGYRPIFGNSAEIRRLFAESQSKPIPFDHDILKRVVPFYHMWSSMYGKTFLYWFGSKPRLAISEPDMIKEVLMNKGGEFGKVPYNPQSKLLFGQGLVGLEGDKWAYHRRIINQAFNMELVKGWVPEIVASVTKMLAKWEEVRGGKEEIEMDVHKELHGLSAEVISRTAFGSSYEKGKRIFNLQEQQMHLFSQAVRSVYIPGFRYLPSKKNRDRWRLEKETRESIQKLIEAKSNLRGNGRNLLSSLMHSYQNEAGGEERLAVEEIIDECKTFYFAGKDTTANLLTWALLLLAKHQEWQSKAREEVLAVFGHNRFPVAEKLNDLKIIGMIINETLRLYPPAVMLMRQTSEKVMLGSLDVPAKTQLYLALTAVHHDTEIWGKDCNKFNPIRFSEPRKHLAAFFPFGLGPRTCVGQNLAIVEAKIVLAMIIQHFNFVVSPTYCHSPMLFITLQPQYGAPILFRRISY 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0250 505 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 496 - -
Glsi05g0250 505 FunFam Cytochrome P450 734A1 25 504 - -
Glsi05g0250 505 SUPERFAMILY Cytochrome P450 72 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 Pfam Cytochrome P450 81 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0250 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Glsi05g0250 505 Gene3D Cytochrome P450 24 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0250 Glsi-ChrGlsi05 48385476 48388215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0250 22 504 Cytochrome P450 AT1G75130 57.202 0.0 588