Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0181 ATGAATTTGAGTCCTAATTACAGTAACGGCTACCATCGGCAGCAGGGTTCAGAAATGCGACCCGGAATGGGTCACAGAGAGCGAGTCCGCCGGGGATCTCGAAGGTCACGTGATTCTAGAGACAGCCACAGTAGCGGTGGTAGCCTTAGGGTTTCCGAGCAACAGCAAAAACAACAGCAGCGGCCTCCTTGTACGGACTTCGATATGGCCTATTTTCATTCTTATGCTCACGTTGGTATCCACGAAGAAATGATCAAGGATCGAGTGCGGACTGAAACTTACAGGGCTGCAATCATGCAACATCAGAGTTTAATTGCAGGCAAAGTTGTAGTGGACGTTGGATGTGGCACTGGCATTCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTGTATGCAGTTGATGCCAGTGACATCGCCCTGCAGGCTAATGAAGTTGTGAAAGCAAATAATCTATCTGATGTTGTCATTGTATTGCATGGAAGAGTTGAGGATGTTCAAATAGATGAAGAGGTCGATGTTATAATTTCAGAATGGATGGGATATATGCTCCTATATGAGAGCATGCTTGGAAGTGTTATCACAGCCAGGGATCGCTGGCTCAAACCTGGAGGTCTTATCCTTCCTTCGAATGCAACGTTGTATATGGCTCCTGTTACCCATGCTGATAGATACAGTGAAAGCATCGACTTCTGGCGTAATGTTTATGGAATTGATATGTCTGCCATGCTACCATTAGCAAAACAGTGTGCATTTGAAGAACCTTCTGTGGAGACAATAACGGGTGAAAATGTTTTGACATGGCCACATGTGGTGAAAAATGTTGACTGTTATACGGTTGCCATTCATGAGCTAGAATCTGTTTCGACTAGGTATAAGTTTAAATCAATGATGCGAGCACCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAATTTAATGGGCCTGTGACTGCAGCAGCCAATTCTTATATTTCAAATTTGTTTGTTGACAACCATCCAGTGGATGGTAGTCAGAGAAAAAAACGGACAAGTCCAAATGAAGCACTGGTCCTGTCCACAGCACCTGAGGACCCTCCAACACATTGGCAACAGACATTGATCTACTTTTATGATCCCATAGAGCTGGAGCAAGATCAACTTATTGAAGGCTCAGTGATTCTGTCACAAAGCAAAGAAAATCCTCGATTTATGAATATTCACCTTGAGTATGCTTCAGGTGGTCGAGCCTATGTGAAAGAGTCTGTTATGAGATGA 1260 0.4397 MNLSPNYSNGYHRQQGSEMRPGMGHRERVRRGSRRSRDSRDSHSSGGSLRVSEQQQKQQQRPPCTDFDMAYFHSYAHVGIHEEMIKDRVRTETYRAAIMQHQSLIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVVIVLHGRVEDVQIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSNATLYMAPVTHADRYSESIDFWRNVYGIDMSAMLPLAKQCAFEEPSVETITGENVLTWPHVVKNVDCYTVAIHELESVSTRYKFKSMMRAPLHGFAFWFDVEFNGPVTAAANSYISNLFVDNHPVDGSQRKKRTSPNEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQLIEGSVILSQSKENPRFMNIHLEYASGGRAYVKESVMR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0181 419 Gene3D - 212 417 - -
Glsi05g0181 419 MobiDBLite consensus disorder prediction 1 15 - -
Glsi05g0181 419 FunFam Protein arginine N-methyltransferase 6 64 210 - -
Glsi05g0181 419 Gene3D Vaccinia Virus protein VP39 65 210 IPR029063 -
Glsi05g0181 419 MobiDBLite consensus disorder prediction 45 63 - -
Glsi05g0181 419 FunFam Protein arginine N-methyltransferase 6 212 417 - -
Glsi05g0181 419 CDD AdoMet_MTases 110 209 - -
Glsi05g0181 419 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 36 407 IPR025799 GO:0016274|GO:0018216
Glsi05g0181 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 74 409 IPR029063 -
Glsi05g0181 419 MobiDBLite consensus disorder prediction 1 63 - -
Glsi05g0181 419 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 68 402 IPR025799 GO:0016274|GO:0018216
Glsi05g0181 419 Pfam Ribosomal protein L11 methyltransferase (PrmA) 106 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0181 Glsi-ChrGlsi05 40347294 40424801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0181 71 386 C2H2 Transcription Factor Family AT3G12270 39.577 2.60e-66 220