Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0160 ATGACCGATGTGCCTACTTCTGAGCAAGCAACAGATGAAGCTCTGGATGTTGTCCACATCAGCAATGAAGACAAAGAGAATGTATTTGCCATGCTTGCTGCTGTATTATGGCTAGGAAACATATCATATACTGTGACAGATAATGAAAATCATGTTCAAGCCGTAGAAGATGAGGCTCTGTTCAATGTCGCCAAATTGATAGGCTGTGAAGTTGGAGATCTCAAATTAACTTTATCAACTCGCAAAATGAAAGTTGGCAATGATAATATTGTCCAAAAGTTGATGCTATCACAGGCTATTGATGCACGAGATGCTTTGGCAAAGTCAATATATGCATGCCTGTTTGATTGGCTAATTGAGCAAATAAACAAATCCCTTGCTGTTGGCAAAAGACGTACTGGCAGATCAATCAGTATTCTAGATATCTATGGCTTTGAATCATTTGACAAGAATAGTTTTGAGCAGTTCTGCATTAATTATGCAAATGAGAGATTGCAGCAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATACAAGATGGCATTGACTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAAAAGAAACCACTGGGATTACTATCTCTGTTAGACGAAGAGTCCACTTTCCCTAATGGCTCGGATTTGACATTTGCTAACAAGCTTAAGCAGCATTTGAATTCTAATTCAAGCTTTAGAGGAGAGCGAGGCAAAGCCTTTACTGTTTGTCATTATGCAGGAGAGGTCACCTATGATACAACTGGATTTCTGGAGAAGAACAGGGACCTGTTACACTTGGATTCCATTCAACTTCTATCTTCATGCACATGCCATCTTCCTCAGATATTTGCATCTCACATGCTTACCCAGTCTGAGAAGCCTGTTGTTGGTCCCTTACACAAGTTAGGTGGAGCAGATTCCCAGAAGCTAAGTGTTGCAACAAAATTCAAGGGTCAACTATTCCAACTGATGCAACGATTAGAAAGCACCACTCCACATTTTATTCGCTGTATTAAGCCCAATAACCTCCAGTCACCGGGATCATATGAGCAAGGTCTTGTACTACAGCAGCTGAGATGTTGTGGGGTACTGGAAGTGGTTCGAATATCAAGATCAGGCTTTCCTACTAGAATGTCTCACCAAAAGTTTGCCAGAAGATACGGTTTTCTTCTCCTTGAAAATGTTGCATCTCAGGATCCACTTAGTGTTTCAGTTGCAATTCTTCACCAGTTTAATATTTTGCCTGAGATGTATCAAGTTGGTTACACAAAATTATTTTTCCGAACAGGACAGATTGGAGTGCTTGAAGATACTAGAAATCGTACACTCCATGGCATTTTACGTGTCCAAAGTTGCTTCAGGGGTCACCAAGTGCGTTGTTACCTCAAGGAACTTCGGAGAGGAATCACTACTCTTCAGTCATTTGTTAGGGGAGAAAGTATTAGAAAGGAATATGCAGCTTCACTTCAGAGACATAGAGCTGCTGTTCTTATACAGAAGCGAATGAAAGCAGTATTTGTGAGAAACAGAATGAAGGGTACTAATGAAGCTGCAATTGTCATACAGTCGGTTATCCGTGGTTGGTTAGTCAGAAGATGCTCAGCAGATATAGGATCATTGAAATCTGGAGGCATGAAGACAAATGAGTCCGATGAGGTACTGGTCAAGTCTTCTTTCCTAGCTGAATTACAGCGCCGGGTACTCAAGGCTGAAGCTGGGCTGAGAGAAAAAGAAGAGGAAAATGACATCCTTCACCAACGTCTGCAACAGTATGAAAGCCGTTGGTCTGAGTATGAATTGAAGATGAAATCTATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTGCAATCTAGCCTTTCCATTGCAAAAAAGAGCCTTGCAATTGATGATTCTGAAAGAAATTCAGATGCATCTGTCAATGCAAGCGATGAGAGAGATTACAGCTGGGATATAGGTAACAATCATAGGCGTCAAGAAAGCAATGGGACAAGATCAATGAGTGCAGGTTTGAGTGTTATAAGTCGGTTGGCTGAAGAATTTGAGCAGAGGAGTCAAGTATTTGGTGATGATGCCAAGTTTTTGGTTGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTGAACCCAGACCAGGAGCTTAGAAGGTTGAAACAGATGTTTGAAGCTTGGAAAAAGGATTATGGGTCAAGACTACGTGAAACAAAGGTCATTTTACATAAACTTGGAAGTGAAGAAGGTGCAGTTGACAAAATGAAGAAGTGGTGGGGAAGAAGGAACAGTACAAGGATAAACTGA 2325 0.4073 MTDVPTSEQATDEALDVVHISNEDKENVFAMLAAVLWLGNISYTVTDNENHVQAVEDEALFNVAKLIGCEVGDLKLTLSTRKMKVGNDNIVQKLMLSQAIDARDALAKSIYACLFDWLIEQINKSLAVGKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGSDLTFANKLKQHLNSNSSFRGERGKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCTCHLPQIFASHMLTQSEKPVVGPLHKLGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGHQVRCYLKELRRGITTLQSFVRGESIRKEYAASLQRHRAAVLIQKRMKAVFVRNRMKGTNEAAIVIQSVIRGWLVRRCSADIGSLKSGGMKTNESDEVLVKSSFLAELQRRVLKAEAGLREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDYSWDIGNNHRRQESNGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYGSRLRETKVILHKLGSEEGAVDKMKKWWGRRNSTRIN 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0160 774 Gene3D - 383 451 - -
Glsi05g0160 774 MobiDBLite consensus disorder prediction 643 676 - -
Glsi05g0160 774 ProSiteProfiles Myosin motor domain profile. 1 450 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi05g0160 774 Coils Coil 570 618 - -
Glsi05g0160 774 PRINTS Myosin heavy chain signature 136 164 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi05g0160 774 PRINTS Myosin heavy chain signature 189 217 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi05g0160 774 SMART MYSc_2a 3 451 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi05g0160 774 ProSiteProfiles IQ motif profile. 454 481 IPR000048 GO:0005515
Glsi05g0160 774 SMART iq_5 474 496 IPR000048 GO:0005515
Glsi05g0160 774 SMART iq_5 500 522 IPR000048 GO:0005515
Glsi05g0160 774 SMART iq_5 523 545 IPR000048 GO:0005515
Glsi05g0160 774 SMART iq_5 451 473 IPR000048 GO:0005515
Glsi05g0160 774 FunFam Unconventional myosin-XIX 148 340 - -
Glsi05g0160 774 ProSiteProfiles IQ motif profile. 524 553 IPR000048 GO:0005515
Glsi05g0160 774 Pfam Myosin head (motor domain) 9 438 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi05g0160 774 Gene3D Myosin VI head, motor domain, U50 subdomain 21 318 - -
Glsi05g0160 774 Gene3D Kinesin motor domain 131 379 IPR036961 -
Glsi05g0160 774 PANTHER MYOSIN 9 767 - -
Glsi05g0160 774 Gene3D - 454 502 - -
Glsi05g0160 774 Gene3D - 503 547 - -
Glsi05g0160 774 Pfam IQ calmodulin-binding motif 526 542 IPR000048 GO:0005515
Glsi05g0160 774 Pfam IQ calmodulin-binding motif 476 495 IPR000048 GO:0005515
Glsi05g0160 774 Pfam IQ calmodulin-binding motif 456 473 IPR000048 GO:0005515
Glsi05g0160 774 Gene3D - 9 19 - -
Glsi05g0160 774 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 496 IPR027417 -
Glsi05g0160 774 Gene3D - 146 340 - -
Glsi05g0160 774 ProSiteProfiles IQ motif profile. 475 504 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0160 Glsi-ChrGlsi05 37504892 37519853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0160 9 772 Myosins gene family AT1G50360 79.400 0.0 1263