Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0155 ATGACATGTATTCATGGAGTTAGAGGGGGGGAAGAAGATGAAGGAGAATGGAATGGGAAGGAAGAGCAAACTCCTAAGGAAAACCATCCACCCATCATAACCTCTACTTCTCACCTTAAGGGTGGGGTATTGATAGATTTCTCAGTCAAGATGATTCGTGTAAATAGGCGAATATGCAACACAAATAGTGTAACTTGGCTGAATAATAATATGGAGAAGATTTCGAGAGGGGAAGAGACAGGTGGTGGATATTTATGGAAGTTTCTACAATCCTCTGTTTCTGTTCATGGGCTGGTTTTGGGAAGCATAGAAGAATACTATGAAAAAATCCATAAGTTTTCTGCAGAGTCTCAAGAAGCATTTGAGAATCGGTTCTACCACAATGAAGAAGACATACAGAGAATAGCCGCCCAGGAGCAGAAAATCTTTCCCTACGAAACCTTGGTCGCAGCTACGAAAAATTTTCACCCTAATCACAAACTAGGTGAGGGAGGCTTTGGACCCGTCTACAAGGGGAAGTTGAATGATGGGAGAGACATTGCAGTGAAGAAATTATCATTGAGATCAAATCAAGGGAGGAAAGAGTTCATAAATGAGGCCAAATTATTGACTCGTGTGCAGCACAGGAATGTGGTGAATTTGTTAGGGTATTGTGCCCATGGCGCAGAGAAGCTGCTTGTTTATGAGTACGTTCGTAATGAGAGCCTTGATAAGTTTCTATTCAAATCCCATAAGAGAGAGCAGCTTGACTGGAAACGGAGGTTTGACATAATAACAGGCATAGCAAGGGGCTTGCTCTATCTGCATGAAGACTCGCACAATTGCATCATCCACCGTGATATCAAGGCCAGCAACATCCTGCTTGATGACAAATGGGTCCCCAAAATTGCAGACTTTGGCATGGCACGTCTCTTCCCAGAAGATCAAACCCATGTCAATACTCGTGTCGTTGGAACCAATGGGTATATGGCTCCAGAGTATGTGATGCATGGACATTTATCAGTGAAGGCAGATGTATTTAGCTATGGGGTTTTGATGTTGGAGATTATCAGTGGTCAACGAAACTCATCGTTTGACTTGGATATAGATGCACAGAATCTTCTAGATTGGGTATACAAGCTTTACAAGAAAGGCAGGAGCTTAGAAATCATGGACAGTACATTAGCAGCTTCAGCAGTAACTGAAAAAGTAGCAATGTGCATTCAACTAGGCCTACTATGCACTCAAGGCGATCCCCAGCTCCGGCCCACCATGCATCAGGTGGTAGTGATATTGTCTAAGAAGCCGGGGCACATGGAAGAACCGGCAAGACCAGGAGTGCCTGGTTCCAGATATAGAAGACGTCACAGGCTCTCTGCGTTGTCTTCCACAGCTGGTAGTTCTTGGGAATCTGGTTCACATACTTTTGATTCAAGCAATAACTACAGCACTAGTGCAACAGCTAGCGCAACCGCAACCGCAACCACCTCAGCTGCTAGAGAATCAGACCCGCATGGGAAACGTCCAATGCAGGGTTAG 1518 0.4447 MTCIHGVRGGEEDEGEWNGKEEQTPKENHPPIITSTSHLKGGVLIDFSVKMIRVNRRICNTNSVTWLNNNMEKISRGEETGGGYLWKFLQSSVSVHGLVLGSIEEYYEKIHKFSAESQEAFENRFYHNEEDIQRIAAQEQKIFPYETLVAATKNFHPNHKLGEGGFGPVYKGKLNDGRDIAVKKLSLRSNQGRKEFINEAKLLTRVQHRNVVNLLGYCAHGAEKLLVYEYVRNESLDKFLFKSHKREQLDWKRRFDIITGIARGLLYLHEDSHNCIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVVGTNGYMAPEYVMHGHLSVKADVFSYGVLMLEIISGQRNSSFDLDIDAQNLLDWVYKLYKKGRSLEIMDSTLAASAVTEKVAMCIQLGLLCTQGDPQLRPTMHQVVVILSKKPGHMEEPARPGVPGSRYRRRHRLSALSSTAGSSWESGSHTFDSSNNYSTSATASATATATTSAARESDPHGKRPMQG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0155 505 Pfam Protein tyrosine and serine/threonine kinase 158 423 IPR001245 GO:0004672|GO:0006468
Glsi05g0155 505 MobiDBLite consensus disorder prediction 456 505 - -
Glsi05g0155 505 SMART serkin_6 155 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0155 505 FunFam Cysteine-rich receptor-like protein kinase 10 232 437 - -
Glsi05g0155 505 MobiDBLite consensus disorder prediction 7 27 - -
Glsi05g0155 505 CDD STKc_IRAK 161 427 - -
Glsi05g0155 505 FunFam Cysteine-rich receptor-like protein kinase 10 119 230 - -
Glsi05g0155 505 Gene3D Phosphorylase Kinase; domain 1 115 230 - -
Glsi05g0155 505 MobiDBLite consensus disorder prediction 1 31 - -
Glsi05g0155 505 MobiDBLite consensus disorder prediction 456 493 - -
Glsi05g0155 505 Gene3D Transferase(Phosphotransferase) domain 1 231 435 - -
Glsi05g0155 505 ProSiteProfiles Protein kinase domain profile. 155 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0155 505 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 123 478 - -
Glsi05g0155 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Glsi05g0155 505 SUPERFAMILY Protein kinase-like (PK-like) 140 434 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0155 Glsi-ChrGlsi05 36724270 36732994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0155 143 439 Receptor kinase-like Gene Family AT4G11530 51.839 1.74e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi05g0155 PK_Tyr_Ser-Thr 3.4e-51 CL0016