Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0148 ATGAGAACCCAACGTTCTCAACTACTGCTTTTCTCCCTCCTCGTCGCAGCTACATTCGTCCATCTCCGCCCAACCACCGCCACCACCACCGATCCCGGCGCCACCGCGTCGTTCATCCGCACAAGTTGCGGCACCACCCTCTATCCCGACCTTTGCTACTACTCCCTCTCTCCCTACGCCAATGCCATCCAACGGAACCCCGGCCAGCTGGCTCGCGTCGCCATAGCCGTGAGCCTCTCAAAGGCCCACCGCATGGCCTCCTACGTCTCCAGTCTCTCCCGCGAAGCCGACTACAGCGCCAACTCTCGCGCCACCTCCGCCCTCCGCGACTGCTTCACGAATCTCGGGGACGCCGTCGACGAGATCCGCGGCTCGCTCAAGCAGATGCGCCAGATAGGAGCCGCTGGCGAAGGGTCTGAGCGCTTTAGGTTCCAGATGAGCAACGTGCAGACGTGGATGAGTGCGGCGCTGACGGACGAAGAGACTTGTACGGACGGATTTGAGGATGTACCAGAAGGTACCGTGAAGACGAATGTATGTGATCGGGTGACGTACGTGAAGAAGTTCACCAGCAATGCGCTTGCGCTGGTGAATCGTTACACTGACAAGGGAACACCTTAA 621 0.5974 MRTQRSQLLLFSLLVAATFVHLRPTTATTTDPGATASFIRTSCGTTLYPDLCYYSLSPYANAIQRNPGQLARVAIAVSLSKAHRMASYVSSLSREADYSANSRATSALRDCFTNLGDAVDEIRGSLKQMRQIGAAGEGSERFRFQMSNVQTWMSAALTDEETCTDGFEDVPEGTVKTNVCDRVTYVKKFTSNALALVNRYTDKGTP 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0148 206 Pfam Plant invertase/pectin methylesterase inhibitor 37 196 IPR006501 GO:0004857
Glsi05g0148 206 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 200 IPR035513 -
Glsi05g0148 206 SMART PMEI_2 34 196 IPR006501 GO:0004857
Glsi05g0148 206 FunFam Pectin methylesterase inhibitor 1 34 200 - -
Glsi05g0148 206 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 196 - -
Glsi05g0148 206 CDD PMEI-like_3 41 201 - -
Glsi05g0148 206 NCBIfam pectinesterase inhibitor domain 10 200 IPR006501 GO:0004857
Glsi05g0148 206 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 201 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0148 Glsi-ChrGlsi05 36091638 36092258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0148 2 196 Carbohydrate Esterase AT5G53370 28.019 7.03e-16 73.6