Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0121 ATGCCTGATTCCCTCGGTGCCTTCAAGCTTCACTCTGATACTCCAAATTCCGCCCTTAATTCCCATGAAGATCCTTCACCAACCCAACCCTATTGTCTTTGCACTCACTGTACCCATCTTTTCTCCTTCAATCACCTTCCGGAGCAAGGTAGAAGTAGTGGGTTTCATGTGCAACCCCAGCAAAGCTCAAGGTGGAGTCCAACCCCAGCACAGCTGCTATACCTTGAAGAATTGTACAGACAGGGAACAAAGACGCCAACAGCTCAACAAATCCAGCAAATAGCTTCACACCTCCGTCAGTTTGGCAGGATTGAAGGAAAGAATGTGTTCTACTGGTTCCAGAATCACAAAGCAAGAGAGCGCCAGAAGCGTCGTCGTTGGGAGATGGAAACTGCTTCTGCTTCTGCTGCCGAAATAAAAGAGATGTACGTTATGGGAAGCTCAGAAAAGCAAGAGGAAGAGGCTGATCAAGGGTTGAGAGGGACAGGTGATGAAGTTAAAGAGACAAAGAAGTGGGCATCTACTTCAAACTGCAGTGGACTTGCAGAGGTCAAAGATAAGGTATCTGCTTCAGTACTGGAACTAGCAGAAAGGGGAGCTAATGTGAGGGCTCAGTTTGAGGAGAGAGAAATACAAGTTCTGAGAAGCAACAGAGGGGAAAGGCAAGCTAGGTGCCAAAATAGGGAGATGCCTTGCTTCACATCCATTCACCTCAAAAACATTGCCACCACAGCTACAACTTCTGTAGTAGCAGCACATACACAAACTTTGAACCCTCTAGATTGTGATGAAGAAGAAATTGCAGATATTAGGACCCTTGAGCTTTTTCCACATAAGAGGGGGGGTACAAGATGGAATTTTCCTCACTGA 870 0.4632 MPDSLGAFKLHSDTPNSALNSHEDPSPTQPYCLCTHCTHLFSFNHLPEQGRSSGFHVQPQQSSRWSPTPAQLLYLEELYRQGTKTPTAQQIQQIASHLRQFGRIEGKNVFYWFQNHKARERQKRRRWEMETASASAAEIKEMYVMGSSEKQEEEADQGLRGTGDEVKETKKWASTSNCSGLAEVKDKVSASVLELAERGANVRAQFEEREIQVLRSNRGERQARCQNREMPCFTSIHLKNIATTATTSVVAAHTQTLNPLDCDEEEIADIRTLELFPHKRGGTRWNFPH 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0121 289 SUPERFAMILY Homeodomain-like 54 126 IPR009057 -
Glsi05g0121 289 Gene3D - 62 128 - -
Glsi05g0121 289 SMART HOX_1 60 127 IPR001356 GO:0003677
Glsi05g0121 289 Pfam Homeodomain 62 122 IPR001356 GO:0003677
Glsi05g0121 289 ProSiteProfiles 'Homeobox' domain profile. 58 123 IPR001356 GO:0003677
Glsi05g0121 289 MobiDBLite consensus disorder prediction 1 25 - -
Glsi05g0121 289 CDD homeodomain 64 124 IPR001356 GO:0003677
Glsi05g0121 289 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 50 280 IPR044555 GO:0003700|GO:0099402
Glsi05g0121 289 MobiDBLite consensus disorder prediction 147 168 - -
Glsi05g0121 289 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0121 Glsi-ChrGlsi05 34804679 34808339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0121 62 179 Wox Gene Family AT3G18010 51.695 1.66e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Glsi05g0121 Homeodomain 2.5e-18 CL0123