Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0117 ATGTCTCGGCAGAGTTCAACGCCCGCATATCACAAATCGAAGACCCTCGACAATAAATATCTAATTGGATTGGTAGCAACTCGGGATGTGGCTGTGGTCTTCTTGTTGTTGGCGTACAGTGGTAAAGTGGAAAGGCAGTGGCCAGGTAATGAGGAGGACTGTTGTTGGTCGTGGGAGAGGATGCTGGGAGATGAGATTGGGAAAGGAGCATATGGTCGAGTTTACAAGGGTTTGGACTTAGAGAATGGAGACTTTGTCGCAATTAAACAAGTTTCGTTGGAGAATATTGCTCAGGAAGATCTCAACATCATCATGCAAGAGATTGATCTATTAAAGAATCTGAATCACAAAAACATTGTAAAATATCTTGGATCCTTAAAGACGAAGACTCACCTGCACATAATTCTTGAATATGTGGAGAATGGCTCCCTTGCAAATATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCTGTTTATATTGCCCAGGTATTGGAAGGCTTGGTTTATCTACATGAACAAGGTGTAATCCATCGGGATATTAAGGGTGCAAACATACTGACAACCAAAGAGGGTCTTGTCAAACTTGCTGATTTTGGTGTAGCAACGAAATTGACTGAGGCCGATGTTAATACTCATTCAGTTGTTGGAACACCATATTGGATGGCTCCAGAGGTTATAGAAATGTCTGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGTGTTCCTCCTTATTATGATCTGCAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAACATCCTCCAATTCCTGATAGCCTGTCTCCTGACATCACTGATTTTCTGCGCCAGTGCTTTAAGAAGGACGCTAGACAAAGGCCTGATGCTAAAACATTACTGTCTCACCCTTGGATACTAAATTGTAGACGTGCACTGCAGTCATCTCTACGTCATAGTGGAACGTTGAGAAATATAGAGGAAGATGATTCAGTGGATGCTGAAGTTTCCGGTGGTGATCATATATGTGCTGGTGAAAGCTCCTCTATGGAGAAAGTGGCTATTGATGAGAACTCTGCAAAAGAGTTATCAACTGAGGCTGCTGATAGCAGCAAACCTCATGAAGACAATGCTTCAGATTATCATTTGCTCCATGGATCAACAGAGAAGCTGGATGATGTTCCATCAGATCAAGTTCTTGCCTTATCCATTCATGAGAAGTCTTCTCTACAAACTGGTTCTAGCAAACTCTCTTCTAATAGAGAAGAAGCTAGGTCTGAGTCAACTGGGGATCATGACATTGCAAATGCCAAAGATTATGATGAAGTCGTGATGAATGGAGAAGTGGGATCTCCACAATCAAGAGGGATAGTTAGAAAGCATGGAGGAAAAGGCAGTTCTATGAATAATGGCAATAAATCAATTAGTTTTGCACCAAGGGGTCAAGATAATGGTTCCCTAAAGGTTATTAAGATGTCACCCTTTATTGAGGGAAATGAGCTGAGTAGATTTAGTGACCCTCCAGGAGATGCCTCCTTAGATGATCTATTTCCCCCATTAGATAAGCCCCCTGAGGAATTGGCAGGCGAGCCTTCGACATCTGCATCCCCGTCACATGCTGGAAAAGGTAATGCATCTATGAATAATGTTGGGAAAAATGATCTGGCCAAAGAGTTGAGGGATACAATTGCTCGGAAGCAGTGGGAAAAGGAGAGTGAAATTGCACAGGTAAACAATGGTGGGAATCTTTTGCGCCTGATGATGGGAGTTCTAAAAGATGATGTAATTGATATAGATGGTTTGGTCTTTGATGAAAAACTTCCTGGAGAAAACCTTTTCCCTCTGCAGGCTGTTGAGTTCAGCAAATTAATTGGGTCATTAAGACTAGAGGAATCAGAAGATGTAATTGTCTCTTCGTGTCAGAAACTTATTGCTATCTTTCACCAACGTCCGGAACAAAAAATTGTTTTTGTTACCCAGCATGGCTTACTTCCTTTAACAGACTTGCTCGAAGTTCCTAAAACTCGTGTCATATGTTCTGTGCTTCAGCTTATGAATCAAATAATCAAGGATAACACTGATTTTCAAGAAAACGCTTGTCTTGTTGGATTGATTCCTGTTGTAATGAGCTTTGCAGTCCCTGATCGACCCCGAGAGATTCGCATGGAAGCAGCTTATTTTTTGCAGCAGCTTTGTCAGTCAAGCTCCTTGACATTGCAAATGTTCATAGCTTGCCGTGGAATACCTGTTTTGGTGGGATTTCTTGAGGCGGATTATGCCAAGTACAGGGAAATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTCTTTAAGCTTCAGCGGTCTACCCCTAGAAATGATTTCTGTCGTATAGCTGCAAAGAATGGAATACTCCTTAGGCTTATAAACACCCTTTATAGCTTAAATGAGGCTACTCGACTAGCTTCAACTCCTGTTGGGGGTGGACAGAATGAGGCACTACTATCTTCGGTAGATCAGCAAGATCTACCTAAAGTGAGGCATGGAATGCTTGATCATCAATTGGAACCTTCGCATGCCTCAACCAACCATCCTCAAAAATTAGATGGTGGTTATGTGGATCTTGATAGGCCTCAATTTAGCAATGCAGCTGCAGAAGTTACTTCATCAGAAAAAAGTCCAAATCTAGTGTCCAGGGATTCTTCGGTCGCTGCAATAAAAGAGAGGGAAATGGATCATTGGAAAGCTGATCCTTCTCGGTCAGATATTGAACTTAGACAGCAGCGTACCAGTACTTCTGCTAACAGGACATCAACAGATAGGCCTCCAAAATTGACAGAACCTGCATTAAATGGATTATCACTAGCAGGTGCTACACAGAAAGAGCAAGTTAGGCCTCTTCTTAGCTTGTTGGAGAAAGAGCCTCCATCTCGGCATTTCTCCGGTCAGCTTGAGTATGTACGCCAGTTATCAGGATTAGAGAGGCATGAAAGCGTACTCCCTTTATTACATGCCTCTGATAAGAAAACAAATGGTGAACTAGACTTTTTGATGGCGGAATTTGCAGATGTTTCTCAACGTGGAAGAGAAAATGGAAATCTTGATTCCAGTGCGAGGGTGTCTCACAAAGCTGTTCCAAAGAAATTAGGGTCTTTGGCATCCAATGATGTAACTGCTTCCACATCTGGGATTGTATCTCAGACAGCTTCAGGTGTACTATCTGGTTCAGGGGTACTAAATGCTAGACCAGGTAGTGCAACTTCGTCTGGTCTACTTTCCCACATGGTTTCATCATTGAATTCAGATGTTGCCAGGGAGTACCTAGAAAAAGTTGCAGATCTTCTGCTTGAGTTTGCTCAAGCAGATACAACAGTCAAGTCTTATATGTGCAGCCAAAGCTTGCTCAGTCGGCTTTTCCAGATGTTCAATAGAGTGGAGCCTCCTATTTTGTTGAAGGTACTGAAGTGTATTAATCATCTGTCAACTGATCCAAATTGCTTAGAGAATCTTCAACGTGCTGAAGCAATAAAATACTTGATACCGAACCTAGAACTCAAAGAAGGGTCTCTTGTATCACAAATACATCATGAGGTCCTGAACGCGCTGTTCAATTTATGCAAGATAAATAAGAGGAGACAAGAGCAAGCAGCTGAAAATGGGATCATTCCCCATTTAATGCTATTCATCACATCAAATTCTCCCTTGAAACAATATGCATTGCCTTTACTGTGTGACATGGCTCATGCATCTCGTAATTCAAGGGAGCAGTTAAGGGCCCATGGTGGTTTGGATGTCTATTTGAACCTTCTTGAGGATGAGCTTTGGTCTGTGACAGCATTAGATTCTATTGCTGTTTGCTTAGCTCATGACAATGATAATAGGAAGGCTGAACAAGCACTGCTGAAAAAGGATGCAGTTCAGAAGCTCGTGAAGTTCTTCCAGTGCTGTCCTGAGCAGTATTTTGTGCACATACTGGAGCCATTCTTGAAAATCATCACAAAATCTGCACGGATTAATACTACATTAGCTGTTAATGGATTAACACCGTTGCTCATTGCAAGGCTTGATCACCAGGATGCCATAGCACGGCTTAATTTACTCAAGTTGATAAAGGCTGTTTATGAACACCACCCGCAGCCGAAGAAGTTGATTGTGGAGAATGATTTGCCTCAGAAACTTCAGAACTTAATAGAGGAACGGAGAGATGGACAAAGCTCAGGAGGCCAAGTATTGGTCAAACAGATGGCTACTTCATTACTTAAAGCTCTACATATAAACACTGTTTTGTAA 4293 0.4212 MSRQSSTPAYHKSKTLDNKYLIGLVATRDVAVVFLLLAYSGKVERQWPGNEEDCCWSWERMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWILNCRRALQSSLRHSGTLRNIEEDDSVDAEVSGGDHICAGESSSMEKVAIDENSAKELSTEAADSSKPHEDNASDYHLLHGSTEKLDDVPSDQVLALSIHEKSSLQTGSSKLSSNREEARSESTGDHDIANAKDYDEVVMNGEVGSPQSRGIVRKHGGKGSSMNNGNKSISFAPRGQDNGSLKVIKMSPFIEGNELSRFSDPPGDASLDDLFPPLDKPPEELAGEPSTSASPSHAGKGNASMNNVGKNDLAKELRDTIARKQWEKESEIAQVNNGGNLLRLMMGVLKDDVIDIDGLVFDEKLPGENLFPLQAVEFSKLIGSLRLEESEDVIVSSCQKLIAIFHQRPEQKIVFVTQHGLLPLTDLLEVPKTRVICSVLQLMNQIIKDNTDFQENACLVGLIPVVMSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQRSTPRNDFCRIAAKNGILLRLINTLYSLNEATRLASTPVGGGQNEALLSSVDQQDLPKVRHGMLDHQLEPSHASTNHPQKLDGGYVDLDRPQFSNAAAEVTSSEKSPNLVSRDSSVAAIKEREMDHWKADPSRSDIELRQQRTSTSANRTSTDRPPKLTEPALNGLSLAGATQKEQVRPLLSLLEKEPPSRHFSGQLEYVRQLSGLERHESVLPLLHASDKKTNGELDFLMAEFADVSQRGRENGNLDSSARVSHKAVPKKLGSLASNDVTASTSGIVSQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNSDVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKVLKCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSQIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMLFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDELWSVTALDSIAVCLAHDNDNRKAEQALLKKDAVQKLVKFFQCCPEQYFVHILEPFLKIITKSARINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPQPKKLIVENDLPQKLQNLIEERRDGQSSGGQVLVKQMATSLLKALHINTVL 1430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0117 1430 FunFam MAP3K epsilon protein kinase 1 620 828 - -
Glsi05g0117 1430 Gene3D - 1081 1233 IPR011989 -
Glsi05g0117 1430 Gene3D Transferase(Phosphotransferase) domain 1 60 346 - -
Glsi05g0117 1430 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 61 772 - -
Glsi05g0117 1430 ProSiteProfiles Protein kinase domain profile. 60 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0117 1430 MobiDBLite consensus disorder prediction 910 925 - -
Glsi05g0117 1430 MobiDBLite consensus disorder prediction 910 950 - -
Glsi05g0117 1430 Gene3D - 1234 1422 IPR011989 -
Glsi05g0117 1430 MobiDBLite consensus disorder prediction 473 489 - -
Glsi05g0117 1430 Gene3D - 621 825 IPR011989 -
Glsi05g0117 1430 MobiDBLite consensus disorder prediction 413 492 - -
Glsi05g0117 1430 SMART serkin_6 60 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0117 1430 MobiDBLite consensus disorder prediction 539 559 - -
Glsi05g0117 1430 FunFam MAP3K epsilon protein kinase 1 57 346 - -
Glsi05g0117 1430 MobiDBLite consensus disorder prediction 413 427 - -
Glsi05g0117 1430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Glsi05g0117 1430 MobiDBLite consensus disorder prediction 926 945 - -
Glsi05g0117 1430 MobiDBLite consensus disorder prediction 428 447 - -
Glsi05g0117 1430 Pfam Protein kinase domain 64 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0117 1430 SUPERFAMILY Protein kinase-like (PK-like) 62 315 IPR011009 -
Glsi05g0117 1430 MobiDBLite consensus disorder prediction 363 388 - -
Glsi05g0117 1430 FunFam MAP3K epsilon protein kinase 1-like 1079 1425 - -
Glsi05g0117 1430 SUPERFAMILY ARM repeat 630 1315 IPR016024 -
Glsi05g0117 1430 PRINTS Tyrosine kinase catalytic domain signature 136 149 IPR001245 GO:0004672|GO:0006468
Glsi05g0117 1430 PRINTS Tyrosine kinase catalytic domain signature 240 262 IPR001245 GO:0004672|GO:0006468
Glsi05g0117 1430 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Glsi05g0117 1430 PRINTS Tyrosine kinase catalytic domain signature 174 192 IPR001245 GO:0004672|GO:0006468
Glsi05g0117 1430 MobiDBLite consensus disorder prediction 508 561 - -
Glsi05g0117 1430 MobiDBLite consensus disorder prediction 857 876 - -
Glsi05g0117 1430 MobiDBLite consensus disorder prediction 337 388 - -
Glsi05g0117 1430 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
Glsi05g0117 1430 CDD STKc_Cdc7_like 61 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0117 Glsi-ChrGlsi05 33802425 33860789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0117 1 1430 MAP Kinase Kinase Kinase AT3G13530 69.952 0.0 1957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Glsi05g0117 Pkinase 1.8e-72 CL0016