Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0102 ATGAGTGCAACTCGTCCAGTGGTCCTCGTAGACTCACAAGAAAACGGAATTCGACTCGTCCATACATTGATGGCTTGTGCAGAAGCCATTCAGCGGAACAGTTTCAGCATCGCTGAAGCTCTGGTGAAGCAGATCGGAATCCTAGCAGTTACCCAAGCCGGTGCCATGCGTAAAGTTGCCACCAACTTGGCGGAAGCTCTCACCGGATATACAGCCAGAAAATGTTAA 228 0.5 MSATRPVVLVDSQENGIRLVHTLMACAEAIQRNSFSIAEALVKQIGILAVTQAGAMRKVATNLAEALTGYTARKC 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0102 75 ProSiteProfiles GRAS family profile. 10 75 IPR005202 -
Glsi05g0102 75 Pfam GRAS domain family 19 69 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0102 Glsi-ChrGlsi05 32442401 32442867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0102 3 67 GRAS Transcription Factor Family AT2G01570 78.462 3.48e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi05g0102 GRAS 3.9e-08 CL0063