LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi05g0051	ATGAGCTTTTGCATAATACAGGTTGGCTATGATGTGGTGAAACCTGAGCAATATATATTTTCCACCCGAAGAATTCCGGTTCCAATAAGAGAGAATCCTTCTACTTTCTATCAGCTTGAAAGGTGCAAGCCAGTTGTTTTGATGATTATAGTTAATTTAGCTATGGCTCTTGTAAATTTTCTTCTAAAGAAAGTTCTTAATGAAGGAATGAGCTACTTTACCATCATAACATATCGACAGTTAATTTCAGCCATTTTCATGGCACCTGTTGCCTACCACTATGAGAGGAAAAAAAAACTGGAGGCTCACATAATATGCCTTCTTTTCCTCAGTGCTCTTGTAGGTGTAACATTCACCCAATGCCTGTTTCTTCATGGACTTAAGTACACATCTGCCACTTTTTCTTGTGCATTCCTCAACATAGTTCCTGTATTTACCTTCCTCATTGCGCTGCCATTTAGCATAGAGAAGGTGAACTTGAGAAGCTTGAGCGGCAAAGCCAAGGTCTTAGGCACTTTGGTGTGCATTTCTGGAGCTTTGTTATTGGCCCTTTACAAAGGAGTGCCCTTAATCAACCCAAAATTTCAAAACACTGCGAGCAATGTTACAAGGGTATCGTCAGTCAATAAGTTAGAGAGATGGATTATAGGTTCAGTACTTCTTACCGCAGGCTGCGTTTTGTGGTCATCATGGTTCCTTATACAAGCAAGGATCAGTAAAACATATCCATGTCAATACTCTAGCACAGCTATTTTGTCACTTTTTAGTGCCATTCAATCAGCAATGTTAAATTTGATCATCAAGAGGAATCATGCTACCTGGATTTTCAGAGGAAAGTTAGAGATAATGAGTGTCATATACGCTGGGTTGGTGGGATCAGGCTTGTGCTATGTGGCAATGTCATGGTGTATCAAACAAAGAGGTCCAGTTTTCACAGCAGCATTTACTCCCCTTATACAGATTTTTGTTGCCGTGCTTGATTTCTCTATCTTGCAAGAGGAAACTTATCTAGGAAGCGTTACAGGATCTGCCATGGTTATTGTTGGCATGTATATTCTTCTATGGGGAAAAAGTAAAGAGGGAGAGCAATATGCGGTGAACAACAGGGAAGCAAATCAAGAAGATGAAGAATCTCATTAG	1140	0.3982	MSFCIIQVGYDVVKPEQYIFSTRRIPVPIRENPSTFYQLERCKPVVLMIIVNLAMALVNFLLKKVLNEGMSYFTIITYRQLISAIFMAPVAYHYERKKKLEAHIICLLFLSALVGVTFTQCLFLHGLKYTSATFSCAFLNIVPVFTFLIALPFSIEKVNLRSLSGKAKVLGTLVCISGALLLALYKGVPLINPKFQNTASNVTRVSSVNKLERWIIGSVLLTAGCVLWSSWFLIQARISKTYPCQYSSTAILSLFSAIQSAMLNLIIKRNHATWIFRGKLEIMSVIYAGLVGSGLCYVAMSWCIKQRGPVFTAAFTPLIQIFVAVLDFSILQEETYLGSVTGSAMVIVGMYILLWGKSKEGEQYAVNNREANQEDEESH	379

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi05g0051	379	PANTHER	WAT1-RELATED PROTEIN	43	367	IPR030184	GO:0016020\|GO:0022857
	Glsi05g0051	379	Pfam	EamA-like transporter family	216	354	IPR000620	GO:0016020
	Glsi05g0051	379	Pfam	EamA-like transporter family	45	182	IPR000620	GO:0016020
	Glsi05g0051	379	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	78	185	-	-
	Glsi05g0051	379	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	283	359	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi05g0051	Glsi-ChrGlsi05	18392775	18395102	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi05g0051	40	362	Nodulin-like Gene Family	AT1G11460	38.650	2.45e-76	238