Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi05g0027 | ATGGAGAACGACCCGGTTCAGCTTTTTCGTTCTGTTGCTCTAACACTTCTCTTTTTGATGACCATTTTGTTTACTCTAACCGAAGAAGTCGCATTTTCGTCCATCAAGACAGATGCACAGGCTCTGCTTATGTTCAAAAAGATGATTCAGAAGGACCCTAACAGAGTTTTATCAGGGTGGCAGTTCAACAGGGATCCATGCACCTGGTATGGAGTTTCCTGCACCGGAAGACGAGTTACTCAGCTTGATCTTAGCGATAACAATCTTGCTGGGAATTCTCTCAATCCTCTGTCTTCTTTAGATATGTTGTCTGTTCTAAATTTGCATTTGAACTCATTTCCTGTAAATTCTACTTCTTTGCTTCAGCTTCCTTATAGTTTGACACTGCTTGATCTATCCTTTTCTGGAGTTTCAGGTCTTCTCCCTGAGAACTTTTTCTCTAGGTGTCCAAATCTTGTCGTTGTGAATCTTTCTTACAACAACTTGACAGGTCCTATACCTGAAAATTTCTTGCAGAATTCCGATAAACTGCAGTCTCTTGATCTCTCTTCTAACAATTTGACAGGGTCAATTTCAAGCTTGAAAATTGAGCGCAATTCCTTGTTGCTACTTGATCTTTCAGGAAACCGTTTATCAGACTCGATTCCATTCTCCTTGTCAAACTGCACCAGTCTTAAAACTTTAAATTTAGGCAATAATTTGATTACAGGGGAAATCCCGAAAGCGTTGGGTCAGCTAAACAAGCTAGAAATATTGGATCTTTCTCATAATCAAATTACTGGCTGGATCCCTTTTGAGTTGGGAAATGTATGTTCTTACCTTAAAGAACTTAGACTTTCTTTCAACAACATTTCAGGTTCAATTCCACCTGCCTTCTCTTCTTGCTCTCTGCTGCAAATTCTTGACATATCTAACAACAATATGTCAGGGTCCTTGCCAATTTCCATCTTTCAAAACCTTGGATCAATTCAGGAACTTCATTTAGGAAATAATGCTATCTCAGGATCTTTTCCTTCATCAATATCTTACTGCAAAAATTTGAGGATTCTGGACTTGAGCTCCAATAAGATATCTGGATTTATTCCCCAAGATATATGTCCAGGGGCAGCCTCCCTTGAGGAGCTGAGAATGCCAGATAATCTCATTGCAGGAGAAATCCCAGCTGAACTGTCAAAATGTTCACAACTGAAGACTATTGATTTTAGTCTAAACTATCTCAATGGGTCAATTCCAGCACAACTTGGACAACTCGCAAATCTTCAGCAACTGATAGCATGGTTCAATGGGTTGGAAGGAAAAATCCCACCGGAATTAGGTAAATGCAGAAATCTGAAGGATATTATACTAAATAATAACCGTCTGACTGGTGAGATTCCTGTTGAGTTGTTTAATTGCAGCAATCTTGAATGGATTTCGCTGACAAGCAATGGACTCACAGGTGAAGTACCGCATGAATTTGGCCTGTTAACGCGATTAGCAGTTTTGCAGCTTGGAAACAACAGCTTGACTGGGGAGATACCAGCAGAGCTAGCAAATTGTAGCAGTTTGGTTTGGTTGGACTTGAACAGTAATAAGCTCACAGGAGAGATCCCCCCTCGACTTGGCAGGCAGCTAGGAGCAAAATCGTTATTTGGCATTCTCTCAGGAAACACATTGGTGTTTGTACGAAATGTTGGAAACTCATGTAAAGGAGTTGGGGGTTTGTTAGAATTTTCCGGTATTCGCCCTGAAAGACTTTTGCAGGTACCAACATTGAGGACATGTGATTTCACAAGATTGTACTCTGGTCCAGTCCTGAGCATGTTTACCAAGTACCAGACTTTGGAATATCTAGACCTTTCCTACAATCAGCTTCGTGGAAAAATCCCAGAAGAATTTGGGGACATGGTGGCTCTACAGGTTCTTGAATTATCTCACAACCAGCTATCTGGAGAGATTCCATCATCACTTGGCCAGCTCAAAAATTTAGGTGTCTTTGATGCATCACATAATAGGTTGCAGGGTCATATCCCAGACTCATTCTCTAATCTATCATTCTTGGTGCAAATTGATCTGTCTAACAATGAGTTAACTGGGCAAATTCCATCAAGAGGACAACTAAGTACACTTCCAGCCAGCCAGTATGCAAACAACCCGGGTCTTTGTGGTGTTCCATTGCCTGAATGCCAGAATGACAACAGCCAACCCTCAACAAATCCCAGTGGGGATGATCGCAAAGGAGGTCATAGGCCAGCAACTGCATCATGGGCAAATAGCATTGTCTTGGGAATTCTCATTTCCATTGCTTCTATATGCATCTTAATTGTGTGGGCAATTGCTATGCGTGCTAGGAGGAAGGAAGCTGAGGAAGTCAAGATGCTTAGTAGCTTGCAAGCATCTCATGCTGCCACAACATGGAAAATTGACAAAGAGAAAGAGCCCTTAAGCATTAATGTGGCAACATTTCAGAGACAGCTGAGGAAGCTCAAGTTCTCACAACTGATTGAAGCAACCAACGGCTTCTCAGCAGCAAGCCTGATTGGATGTGGTGGGTTTGGAGAAGTTTTCAGGGCTACACTCAAGGATGGGTCAAGTGTTGCAATCAAAAAGCTCATTCGACTGAGCTGCCAGGGTGATAGAGAATTCATGGCTGAGATGGAAACCTTGGGGAAGATCAAGCATAAAAATCTAGTGCCCTTATTGGGATATTGTAAAGTAGGTGAAGAGAGGCTTCTTGTTTATGAGTACATGGAATATGGAAGCCTAGAAGAAATGCTCCATGGGAGAACAAAGACACGAGATCGGCGAATTTTAACATGGGAAGAAAGGAAAAAAATTGCGAGAGGTGCTGCCAAAGGACTTTGTTTTCTACACCACAATTGCATCCCACACATAATACACCGAGACATGAAATCAAGCAATGTTCTACTTGACCATGAAATGGACGCCAGGGTTTCAGATTTTGGAATGGCAAGACTAATAAGCGCCCTTGATACCCATCTAAGTGTTAGCACACTAGCAGGAACACCTGGATATGTGCCACCAGAGTACTACCAAAGTTTTCGGTGCACTGCAAAGGGAGATGTCTACTCATTTGGAGTTGTCATGTTGGAACTCCTTACTGGGAAACGACCAACTGATAAGGAAGACTTTGGTGACACTAACTTGGTGGGATGGGCCAAGATGAAGGTTCGTGAAGGGAAACAAATGGAAGTAATTGATCCTGAGTTACTTTTGGTGACTAAAGGAACGGATGAAGCAGAAGTTAAAGAAGTGAAAGAGATGATACGATATTTAGAGATAACATTACAGTGTGTTGATGACTTTCCTTCCAAAAGGCCAAATATGTTGCAGGTAGTGGCCATGCTGAGAGAGCTGATGCCTGGATCAGCTGATGGAAGCAGCAACAGTGCTTGA | 3396 | 0.4205 | MENDPVQLFRSVALTLLFLMTILFTLTEEVAFSSIKTDAQALLMFKKMIQKDPNRVLSGWQFNRDPCTWYGVSCTGRRVTQLDLSDNNLAGNSLNPLSSLDMLSVLNLHLNSFPVNSTSLLQLPYSLTLLDLSFSGVSGLLPENFFSRCPNLVVVNLSYNNLTGPIPENFLQNSDKLQSLDLSSNNLTGSISSLKIERNSLLLLDLSGNRLSDSIPFSLSNCTSLKTLNLGNNLITGEIPKALGQLNKLEILDLSHNQITGWIPFELGNVCSYLKELRLSFNNISGSIPPAFSSCSLLQILDISNNNMSGSLPISIFQNLGSIQELHLGNNAISGSFPSSISYCKNLRILDLSSNKISGFIPQDICPGAASLEELRMPDNLIAGEIPAELSKCSQLKTIDFSLNYLNGSIPAQLGQLANLQQLIAWFNGLEGKIPPELGKCRNLKDIILNNNRLTGEIPVELFNCSNLEWISLTSNGLTGEVPHEFGLLTRLAVLQLGNNSLTGEIPAELANCSSLVWLDLNSNKLTGEIPPRLGRQLGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLLQVPTLRTCDFTRLYSGPVLSMFTKYQTLEYLDLSYNQLRGKIPEEFGDMVALQVLELSHNQLSGEIPSSLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSNNELTGQIPSRGQLSTLPASQYANNPGLCGVPLPECQNDNSQPSTNPSGDDRKGGHRPATASWANSIVLGILISIASICILIVWAIAMRARRKEAEEVKMLSSLQASHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFRATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHKNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRTKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMDARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLTGKRPTDKEDFGDTNLVGWAKMKVREGKQMEVIDPELLLVTKGTDEAEVKEVKEMIRYLEITLQCVDDFPSKRPNMLQVVAMLRELMPGSADGSSNSA | 1131 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi05g0027 | 1131 | MobiDBLite | consensus disorder prediction | 719 | 743 | - | - | |
| Glsi05g0027 | 1131 | Gene3D | Ribonuclease Inhibitor | 37 | 145 | IPR032675 | - | |
| Glsi05g0027 | 1131 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 169 | 370 | - | - | |
| Glsi05g0027 | 1131 | ProSitePatterns | Protein kinases ATP-binding region signature. | 840 | 863 | IPR017441 | GO:0005524 | |
| Glsi05g0027 | 1131 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 795 | 909 | - | - | |
| Glsi05g0027 | 1131 | ProSiteProfiles | Leucine-rich repeat profile. | 248 | 269 | IPR001611 | GO:0005515 | |
| Glsi05g0027 | 1131 | Gene3D | Ribonuclease Inhibitor | 166 | 722 | IPR032675 | - | |
| Glsi05g0027 | 1131 | Pfam | Leucine rich repeat | 203 | 259 | IPR001611 | GO:0005515 | |
| Glsi05g0027 | 1131 | Pfam | Leucine rich repeat | 466 | 526 | IPR001611 | GO:0005515 | |
| Glsi05g0027 | 1131 | Pfam | Leucine rich repeat | 600 | 642 | IPR001611 | GO:0005515 | |
| Glsi05g0027 | 1131 | Pfam | Leucine rich repeat | 273 | 333 | IPR001611 | GO:0005515 | |
| Glsi05g0027 | 1131 | Pfam | Leucine rich repeat | 126 | 187 | IPR001611 | GO:0005515 | |
| Glsi05g0027 | 1131 | SUPERFAMILY | L domain-like | 37 | 313 | - | - | |
| Glsi05g0027 | 1131 | ProSiteProfiles | Leucine-rich repeat profile. | 176 | 198 | IPR001611 | GO:0005515 | |
| Glsi05g0027 | 1131 | ProSiteProfiles | Protein kinase domain profile. | 834 | 1120 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Glsi05g0027 | 1131 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 371 | 553 | - | - | |
| Glsi05g0027 | 1131 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 266 | 1118 | - | - | |
| Glsi05g0027 | 1131 | Gene3D | Phosphorylase Kinase; domain 1 | 792 | 909 | - | - | |
| Glsi05g0027 | 1131 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 958 | 970 | IPR008271 | GO:0004672|GO:0006468 | |
| Glsi05g0027 | 1131 | Pfam | Brassinosteroid receptor island domain | 544 | 603 | IPR045381 | - | |
| Glsi05g0027 | 1131 | PRINTS | Leucine-rich repeat signature | 177 | 190 | - | - | |
| Glsi05g0027 | 1131 | PRINTS | Leucine-rich repeat signature | 246 | 259 | - | - | |
| Glsi05g0027 | 1131 | CDD | STKc_IRAK | 840 | 1119 | - | - | |
| Glsi05g0027 | 1131 | SUPERFAMILY | RNI-like | 239 | 533 | - | - | |
| Glsi05g0027 | 1131 | ProSiteProfiles | Leucine-rich repeat profile. | 346 | 367 | IPR001611 | GO:0005515 | |
| Glsi05g0027 | 1131 | Pfam | Leucine rich repeat N-terminal domain | 36 | 74 | IPR013210 | - | |
| Glsi05g0027 | 1131 | SMART | LRR_typ_2 | 345 | 368 | IPR003591 | - | |
| Glsi05g0027 | 1131 | SMART | LRR_typ_2 | 246 | 269 | IPR003591 | - | |
| Glsi05g0027 | 1131 | SMART | LRR_typ_2 | 514 | 537 | IPR003591 | - | |
| Glsi05g0027 | 1131 | SMART | LRR_typ_2 | 417 | 441 | IPR003591 | - | |
| Glsi05g0027 | 1131 | SMART | LRR_typ_2 | 149 | 173 | IPR003591 | - | |
| Glsi05g0027 | 1131 | SMART | LRR_typ_2 | 629 | 653 | IPR003591 | - | |
| Glsi05g0027 | 1131 | SMART | LRR_typ_2 | 320 | 344 | IPR003591 | - | |
| Glsi05g0027 | 1131 | SMART | LRR_typ_2 | 442 | 465 | IPR003591 | - | |
| Glsi05g0027 | 1131 | SMART | LRR_typ_2 | 489 | 513 | IPR003591 | - | |
| Glsi05g0027 | 1131 | MobiDBLite | consensus disorder prediction | 721 | 735 | - | - | |
| Glsi05g0027 | 1131 | Gene3D | Transferase(Phosphotransferase) domain 1 | 910 | 1127 | - | - | |
| Glsi05g0027 | 1131 | SMART | LRR_sd22_2 | 174 | 196 | - | - | |
| Glsi05g0027 | 1131 | SMART | LRR_sd22_2 | 653 | 679 | - | - | |
| Glsi05g0027 | 1131 | SMART | LRR_sd22_2 | 344 | 359 | - | - | |
| Glsi05g0027 | 1131 | SMART | LRR_sd22_2 | 246 | 267 | - | - | |
| Glsi05g0027 | 1131 | Gene3D | - | 547 | 603 | - | - | |
| Glsi05g0027 | 1131 | SUPERFAMILY | L domain-like | 572 | 719 | - | - | |
| Glsi05g0027 | 1131 | Pfam | Leucine Rich repeat | 343 | 358 | IPR001611 | GO:0005515 | |
| Glsi05g0027 | 1131 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 910 | 1127 | - | - | |
| Glsi05g0027 | 1131 | Pfam | Protein tyrosine and serine/threonine kinase | 838 | 1115 | IPR001245 | GO:0004672|GO:0006468 | |
| Glsi05g0027 | 1131 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 37 | 147 | - | - | |
| Glsi05g0027 | 1131 | SUPERFAMILY | Protein kinase-like (PK-like) | 815 | 1116 | IPR011009 | - | |
| Glsi05g0027 | 1131 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 569 | 726 | - | - | |
| Glsi05g0027 | 1131 | SMART | serkin_6 | 834 | 1120 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi05g0027 | Glsi-ChrGlsi05 | 9089231 | 9092626 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi05g0027 | 42 | 1119 | Receptor kinase-like Gene Family | AT1G55610 | 49.330 | 0.0 | 1007 |
Transcription factors information