Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0026 ATGGCTACGAAACGTGCTTGTCCTTTGGATGAACAACCCACAGCTTCATCCGAAGAAGAGGAAGCTTCATCTGAAGAGGAAGATGAAGAAGACGATGAACCGGCAAAACCGTTTTCCACTTTGCCAGCCCCTGCTGCTTCATCTGAAGAGGAAGATGAAGAAGACGATGAACCGGCAAAACCGTTTTCCACTTTGCCAGCCCCTGCTGCTGAAAAGAAACCTAGTTCCAAAAAGCCGCCAACTCCTGCTACAAAATCTCAACCAAAATCTTCATCTTCGGAATCAGGGACAGAATCCGATTCGGGATCGAACTCCGAAGATGAGCGACCCAGTGGAACTGCGGACCCAAAAATAAAACTGATTGCGTTCAAGCCCATGAAAGAAACCCCAAAGGTCAAGAAGCCAAAGTCCCAGCCCTACGCTAAGCCAGCCAGATCGGCAACGAAGCGCCCAAATGAGAAGAATTGGCCAGTAAGTGACTCGGAAAGGGCCAAGAAGAAGGGCACGGATGGTGCCGGTGATGACGAGATCCCGGTGGCAGAGGGCGATACGAAGAATTCTGGGGATGATTCCAAGAAACTCTTTCAGAGGCTGTGGAGTGAAGACGATGAAATTGCGATACTCGAGGGCATGGTTGAATATTCGGTCAAGACTGGAGCAAACGCAGGTAAGGATATGAATGCATTTCACGATTTCATCAAGACATCGCTTCATGTTGATGTTTCAAGGTCACAATTGATGGATAAGATTCGTAGACTGAAGAAGAAGTATGAGAATAATGCAGGGAGAGGCAAAAAGGGTAAGGACCGGAGTTTTTCGAAACCACACGACAAGAAAGCCTTTGAATTATCGAAGAAGATCTGGGCCACTGAAAGAGACAATGGAGGAATAGAACATACGAAGTCTAATGCTAAAGATGGGAAAAGTCAGAAGGAATGTAGTAGGACCATGACAACTCCGAAAGCAAAAGCTGAGCTGGAATCAAAGGAAGCTAGAAAGATTGATATTGATCGAAATGCTGGCTCATCGCTGAGTTTAAGTGAAATGAATCGGTTTGACAAAATTCTGGGTCTATCAGGGTTGGATGAGGATGCTATAAAGAGGGGATTCGAAGTGATTGGAGCATCACAGAGGGCAGAGTTGGAGGAGAGGTGGAAGAAACTGCAATTTTCTGAATTGGAGCATTTTGTGAAGCGAGCAGAACTAATTAAGGATCAAGCTTTGTTGTTATGGGAGGCATACAAGTCATCAAACTGTTAG 1260 0.4579 MATKRACPLDEQPTASSEEEEASSEEEDEEDDEPAKPFSTLPAPAASSEEEDEEDDEPAKPFSTLPAPAAEKKPSSKKPPTPATKSQPKSSSSESGTESDSGSNSEDERPSGTADPKIKLIAFKPMKETPKVKKPKSQPYAKPARSATKRPNEKNWPVSDSERAKKKGTDGAGDDEIPVAEGDTKNSGDDSKKLFQRLWSEDDEIAILEGMVEYSVKTGANAGKDMNAFHDFIKTSLHVDVSRSQLMDKIRRLKKKYENNAGRGKKGKDRSFSKPHDKKAFELSKKIWATERDNGGIEHTKSNAKDGKSQKECSRTMTTPKAKAELESKEARKIDIDRNAGSSLSLSEMNRFDKILGLSGLDEDAIKRGFEVIGASQRAELEERWKKLQFSELEHFVKRAELIKDQALLLWEAYKSSNC 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0026 419 MobiDBLite consensus disorder prediction 79 100 - -
Glsi05g0026 419 MobiDBLite consensus disorder prediction 1 191 - -
Glsi05g0026 419 MobiDBLite consensus disorder prediction 255 278 - -
Glsi05g0026 419 PANTHER BNAANNG10740D PROTEIN-RELATED 85 407 IPR007592 GO:0006355
Glsi05g0026 419 Pfam Protein of unknown function, DUF573 195 288 IPR007592 GO:0006355
Glsi05g0026 419 MobiDBLite consensus disorder prediction 14 34 - -
Glsi05g0026 419 MobiDBLite consensus disorder prediction 121 135 - -
Glsi05g0026 419 MobiDBLite consensus disorder prediction 155 191 - -
Glsi05g0026 419 MobiDBLite consensus disorder prediction 293 313 - -
Glsi05g0026 419 MobiDBLite consensus disorder prediction 293 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0026 Glsi-ChrGlsi05 7164950 7166209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0026 89 416 GeBP Transcription Factor Family AT1G61730 32.945 2.96e-36 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Glsi05g0026 DUF573 4.5e-36 CL0123