Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0009 ATGAATGGCTTTCCGTCATGTGAAGATCTCAAGGAGTCTAGTAACACTTTAGTAGTGTTATCAAAAGCGGTTGATGTGGCTGCATTAGGTTTGAGGTGGGGCAGGTCAACGCTCACTGGGCAACAAACTCGAAATTTCATTGAAGCTGTGGAGCAATATGTTCACTTGGGACTACGTACGCTATGTTTGGCTTGGCGAGAATTAAAGGAAGATGAATATCAAGAATGGTCTTTGATGTTTAAAGAGGCCAGAAGCACTTTGGTTGATAGGGAGTGGAGAGTAGTTGAGGTCTGCCAAAGAGTAGAGCACAACTTGGAAGTTCTCAATGTAACAGCAATAGAAGATCATTTACAAGATGTAGTGCCTGAAACAATAGAATCACTAAGAAAAGCTGGAATAAATTTTTGGAAGCTAATTGGAGACAAGCAGAATACTGCTATACAAATTGCTTTGTCATGCAATTTTATTCCCTAG 474 0.403 MNGFPSCEDLKESSNTLVVLSKAVDVAALGLRWGRSTLTGQQTRNFIEAVEQYVHLGLRTLCLAWRELKEDEYQEWSLMFKEARSTLVDREWRVVEVCQRVEHNLEVLNVTAIEDHLQDVVPETIESLRKAGINFWKLIGDKQNTAIQIALSCNFIP 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0009 157 Gene3D - 105 157 IPR023214 -
Glsi05g0009 157 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 15 156 - -
Glsi05g0009 157 SUPERFAMILY HAD-like 36 155 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0009 Glsi-ChrGlsi05 1362787 1363787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0009 17 156 Primary Pumps ATPases AT5G44240 70.000 2.04e-59 196