Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2290 ATGGATGGGGTCAGCCATGGTAATGAAGCGGAGCAGCCTCAGTACAGAGACTTGGGCGCTGCATCCTCGTCTTCAGCATCAACGGCATTAGGATGGCGTCCCAGCCAGCGTGTGTTTACTCCTTATGTGCTGCCGGGTGAAGCTTCCGACAAGTCCCAATCTTTGCGTGTGGTTGTGAGGAAACCCCTGGTGGCAAGATTAACCAAGGAGATAGTTGAAACATACCAAATATGCAATCCGCAGTTCAAATATTCTGAAGAGCTAAATCCAAAAAGATATTTAACCAGCCCGTCAGTTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCAGATCTAATTCTGACAGTGAACTTTGTCTTGATCAATTTAGAGAGAAATAGAAGATATCTTGTCAAAGATGTCCTTGGCCATGGGACATTTGGACAAGTGGCTAAATGCTGGGTTTCAGATACTAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCGTACTATCAGCAGGCACTGGTTGAAGTGTCTATTTTGACAACGTTAAACAAGAAGTATGATCCTGAGGATAAGCATCACATTGTTCGTATATATGATTACTTTGTATATCAACGGCATTTGTGCATATGTTTTGAACTGCTGGACACAAACTTGTATGAGCTTATCAAGTTGAATCATTTTAGGGGACTATCACTGAGTATTGTTCAGTTGTTCTCTAAGCAGATATTACATGGACTGGCTCTATTAAAAGATGCTGGCATTATTCATTGTGATCTGAAGCCAGAAAATATTCTATTATGTACAAGTGTGAAGCCAGCAGAAGTCAAGATTATTGATTTTGGATCGGCATGCATGGAAGATCGCACTGTTTACTCCTACATTCAGAGTCGGTACTATAGGTCTCCTGAGGTTCTACTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCTGAATTGTTTCTCGGATTACCATTATTTCCTGGTGCTTCAGAATTTGATCTTTTGAGGCGGATGATTGAAATACTTGGAGGACAACCTCCTGATTATGTACTGAGGGAGGCTAAAAGCACTAGTAAGTTCTTTAAGTGCATCGGGAGTCTCCAGAATGTAGAGAGCAGTGAGATTTTGACTAATGGAAGAAGTGCTTATCAAGCATTGACAGAGGAAGAATATGAAGCTAGAGATTCGAAGAAGCCGACAATTGGGAAAGAATATTTTAATCATATGAACCTTGAAGCAATTGTTACAAACTATCCCTATAGGAAAAACTTGCCCAAGGAAGATATTGTCAAAGAAAGTCAAATACGGCTGGCTTTAATTGATTTTTTGAGAGGGCTTGTTGAATTTGATCCTGCAAAACGATGGTCACCCTTCCAGGCTTCAGGGCATCCTTTTGTGACAGGGGAACCTTTTACCCACCCTTATAAGCCTCCTCCAGAGACTCCTCGCGTGCCGGTTATTCAAAGCATCAAGGTGGATCATCACCCAGGTGGAGGGCACTGGTTTGCTGCTGGTCTATCACCTAATGTTCCAAGCAAAAACAGGCCTTCCCTGTATGGAAGCTCACATTTTCAAATGGTACAATATCCACCTGCTAATAGTTATGGCAGTGTAGGAAGCCATGGTAGCTATAATGATAGTGTTGGGCTTGGAAGCAGCTACGGAAGTTATGGAGAAAGCGGTAACATGTTCGCTTACTATTCACCTGTTGGTCCATCTGGTATACACATGCGTGGTCAGGGCAGCACATCAATGCTTGGAAATAGTCCTGATGCACGGAGGAGAGTCATTCAATACCAGCCTGGGAATGGGCTAGGTATAAGCCCATCAGCCGGAAATTTTTCCTATCTGCCCCTTGGTGCCAGTCCCTCACAATTTACTCCTCCAAGTTCCTTTACACAAGTTTCAACTGGCTCTCCAGGACACTATGGACCTACTTCTCCTGCAAGAGGCACTTCTCATGGATCACCGTTGGGGAAGACATCTGCAATTAGCCATTTTAATAGAAGAAAAAATTGGGGATGTTCTGGAAGTCCTCAAACTCAGGAGATAATATTTTCTCCACATTGGCATGGTCAATGTCCTGACAGCTCCAGCCATTCTGAGGGAACAGCTCAAGTTCTTAGTAGTTCACCATCTTATCTGCAGTCATATACCAACGCTGCAAACTGGAAGCAGCGTGGAGGTGGAGGCATATCTACTGGATACTCTGTTAATCAGAAAACGACATGCTTGTTTATGCCTTGTTCTAACATGAACTTGCAATCAACAGAACTGGATCACGACAATCCTGAGACTTCCTTATCATTGCCTGATCCTGGAGATTGGGATCCTAATTATAGTGATGAACTTCTTCTGCAAGACGATGGTTCAGATGAAAGCTTCTTGACATCTGAGTTTGGCAGAAGTATGAATCTTGGTTCCACAGAACCATTAGTTGGATTTGGAAGATTCAACCATGTCTCCAGCACAAGCTCTCCTATGTCCGTTCAGAGACTAAATGGACCGGTACAAGCACATTCTAATGTAGAGATGGGTAGCCCACCAGCTCATGATTTGCAAGCTGGATACATGCGCTCCTTTTCAAAGCCTTTTCATCTCATGCCTCGTATTTTACAAAATTCTCCAAGCCGTTTTGGATTGCAACCTATTCAAAGATTTGGCCATAGTAGACCCACTCGAGTGGGTGAATGGAATCAAATTAAGGTCCAGGCTCCTCCTTCCAGCTTCAGCAGTGGGGACCCACGTTCTCCAAGAAATAACTCATTCACCAATAGTATGACATGGGGGCGAAGAGTCAATCCTCCTGTCTCAAACATTTCACCAACATCCCGTGCTACAAAAGACTATGCAAGGATAGACTAG 2883 0.4318 MDGVSHGNEAEQPQYRDLGAASSSSASTALGWRPSQRVFTPYVLPGEASDKSQSLRVVVRKPLVARLTKEIVETYQICNPQFKYSEELNPKRYLTSPSVGVLNDGYDNVNSDLILTVNFVLINLERNRRYLVKDVLGHGTFGQVAKCWVSDTNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKLNHFRGLSLSIVQLFSKQILHGLALLKDAGIIHCDLKPENILLCTSVKPAEVKIIDFGSACMEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDYVLREAKSTSKFFKCIGSLQNVESSEILTNGRSAYQALTEEEYEARDSKKPTIGKEYFNHMNLEAIVTNYPYRKNLPKEDIVKESQIRLALIDFLRGLVEFDPAKRWSPFQASGHPFVTGEPFTHPYKPPPETPRVPVIQSIKVDHHPGGGHWFAAGLSPNVPSKNRPSLYGSSHFQMVQYPPANSYGSVGSHGSYNDSVGLGSSYGSYGESGNMFAYYSPVGPSGIHMRGQGSTSMLGNSPDARRRVIQYQPGNGLGISPSAGNFSYLPLGASPSQFTPPSSFTQVSTGSPGHYGPTSPARGTSHGSPLGKTSAISHFNRRKNWGCSGSPQTQEIIFSPHWHGQCPDSSSHSEGTAQVLSSSPSYLQSYTNAANWKQRGGGGISTGYSVNQKTTCLFMPCSNMNLQSTELDHDNPETSLSLPDPGDWDPNYSDELLLQDDGSDESFLTSEFGRSMNLGSTEPLVGFGRFNHVSSTSSPMSVQRLNGPVQAHSNVEMGSPPAHDLQAGYMRSFSKPFHLMPRILQNSPSRFGLQPIQRFGHSRPTRVGEWNQIKVQAPPSSFSSGDPRSPRNNSFTNSMTWGRRVNPPVSNISPTSRATKDYARID 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2290 960 MobiDBLite consensus disorder prediction 909 952 - -
Glsi04g2290 960 PANTHER DUAL SPECIFICITY PROTEIN KINASE 59 475 - -
Glsi04g2290 960 MobiDBLite consensus disorder prediction 1 20 - -
Glsi04g2290 960 Gene3D Phosphorylase Kinase; domain 1 95 210 - -
Glsi04g2290 960 Pfam Protein kinase domain 132 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g2290 960 MobiDBLite consensus disorder prediction 633 649 - -
Glsi04g2290 960 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 93 209 - -
Glsi04g2290 960 SMART serkin_6 130 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g2290 960 Gene3D Transferase(Phosphotransferase) domain 1 211 473 - -
Glsi04g2290 960 MobiDBLite consensus disorder prediction 694 714 - -
Glsi04g2290 960 SUPERFAMILY Protein kinase-like (PK-like) 125 494 IPR011009 -
Glsi04g2290 960 CDD PKc_YAK1 130 472 - -
Glsi04g2290 960 MobiDBLite consensus disorder prediction 909 960 - -
Glsi04g2290 960 MobiDBLite consensus disorder prediction 633 663 - -
Glsi04g2290 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Glsi04g2290 960 ProSiteProfiles Protein kinase domain profile. 130 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g2290 960 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2290 Glsi-ChrGlsi04 75576610 75674734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2290 129 358 MAP Kinase Gene Family AT3G18040 34.286 2.45e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Glsi04g2290 Pkinase 3e-49 CL0016