Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2260 ATGGAAGATCATAATCAATGGCATCCCTATGACCCACTTCTTCTCACTGACGCCTCTTTGCTACAAGAAAGCTCTTCCCTTCACTCCATTTGTAAGAGCTCTGGTCCATTTCTTCCAATTCATCCTTCTCTTTTGGAAGTACGCCATGATTCAAAGGTTTCAGCTTTGTCTTTAGATGGGCCCTCTTGGTTTAACAGTTATTTTATTTTTGATTTAGCAGACAATTCACAAACATCGCTGATCTCTGGAAGTTCAACAATGGCGGATCCTGAATCGCAGGGCAGCCTAATTAACGAATTTTCTTGCAAAAGACAAGGCTTTGACGACAATGGCGTGCAATTCGAAGACCCAGTTGCGAAAGATGTGATCGATGGTCGATCAATATTGGGGTATTCTTTAACGTCCCCTGATTTGGTAATCTGTGCTGGCTCACCAGATATTAACATAAATAGCTGCTTGGACTCCCCTGAGTTGTTGGAGAGCAAATCTCGTCAGCAAGTAGAGTCGCCTATGGAGCTTTCTTTAGAGAATGGAATCAATGGGTCTGAAGTTGATAAGGCAAAGAAGACCCCAACTGTGAAATTCTCTAATTTTTGCCAAACCTTTAAGGAACTATCTCCTGAAGCCTCCTTTGAGCTTCTTCCGCCCCCTGCAGTCAATGATGAGTCGCCTCAAGATTACTCTCCTAGAGACAATGAATTGCTAGAAGTTATGGAGGTGTCACAAGAAGCAGAGTTGGTGCCGTCAAAAGATAGCGGAGATAGTGGAGGAGAAGAGGAAATTCAGAAGCTGAAAAGAGATTTTGAGTTTCAGAAAAAGGAGCTGGCAGAAACGAGGAGGGTGTTGGAGGAACTTAAGAGGGAGAATCAACAGAAAAGTGGAGAATGCCAGGAAGCACGGAAGTCGTTGCAAGAGCTCCAGAATGAGCTCATGCGCAAGTCCATGCATGTAGGATCATTGGCATTTGCCATTGAGGGGCAAGTGAAAGAAAAAAGCAGGTGGTTTTCCACCTTGAGAGACTTGATGAGGAAAGTGAAGATTATGAAAATGGAACACATCAAGCTATCAGAGGAAGTAGAGACATATAAGAATTATCTTGCAGATATGAGTCAAATGGGGATGACTATCAAGTCCAAGATAAATGAACAACTCGAGTTACATGAAGATCTCAAGTCCAAATATATTGAAGGGGCTAAGGAACAAAAAGAACTTTACAACAAGGTTTTGGAGTTGAGAGGAAACATAAGGGTCTTTTGCCGGTGTCGGCCTCTTAATGCTGTAGAGATAACAGCGGGAGCTACAATGGCCATAGATTTTGAATCTGCCAAAGATGGTGAGCTTACTGTAATGTCAAATGGGGCTCCTAGAAAGACTTTCAAGTTTGATGATGTTTTTGGCCCCCAAGCAGATCAAGCTGACATTTTTGAAGGCACAGCACCATTTGCAACCTCAGTTCTAGATGGGTACAATGTATGCATATTTGCTTATGGGCAGACTGGATCAGGAAAAACATTTACAATGGAGGGTACAGAAGAGGCTCGTGGTGTTAATTTCAGGACTCTTGAGAAAATGTTTGACATAATCAAGGAGAGAGAGAAGCTATATCGTTATGATGTCTCTGTAAGTGTCTTAGAAGTCTACAATGAGCAAATAAGAGATTTGCTGGTTTCAGCAAATCAGCCAGGGATAGCTGCAAGAAGGCTTGAAATAAGGCAAGCAGGTGAAGGAATGCATCATGTTCCAGGGTTGGTTGAGGCACATGTGAATAACATGACTGAAGTCTGGGAAGTCCTTCAAACTGGCGGTAATGCGAGGGCTGTTAGCTCAACCAATGCCAATGAGCACAGCAGCCGATCCCACTGCATTCACTGTGTTATGGTTAAAGGGGAGAATTTGTTGAATGGGGAATACACAAGAAGCAAGTTGTGGCTGGTGGACCTGGCAGGCAGTGAGCGAGTGGCAAAGACAGAAGTGCAAGGAGAACGACTAAAGGAGACACAAAATATTAATAGGTCTCTGTCTGCACTAGGAGATGTCATATCAGCTCTTGCAACAAAATGCCCACACGTCCCTTTCAGAAACTCCAAGCTTACCCACTTGCTGCAAGACTCTTTAGGTGGAGATTCAAAGACACTCATGTTTGTACAGATCAGCCCTAATGAAAATGATTTGAGTGAGACAATTTGCTCTCTGAACTTCGCTAGCAGAGTGAGAGGAATAGAGTTGGGCCCTGCCAAGAGGCAGTTGGACTCTACTGAACTTCTGAAATACAAACAGATGGCTGAGAAAACCAAGCAAGAGATGAAGATTAAGGATTTGCAAATCAAGAAGATGGAGGAAACAATATTTGGATTAGACTCTAAGATAAAGGAGAGAGATATTAAAAACAAAAGTCTACTAGACAAGGTCAAGGAGCTGGAATCACAACTTCTGATTGAGAGAAAGCTAGCACGTCAACATGTAGACTCAAAGATAGCTGAGCAGCAACTGCATAAGCATCATGAGCAAAATAATGCACCTATGAAACCTGCACTTGCAAATCGATCATCAGCTCGACCACTAATGGAGAACAACTTGAAACCTTCCCTGCCCTTTCCTGCAATGGACAGCTCTATCAAGTACATTGATCACAACGAAAAAGAAAACAATCCTGAGATAGCTGACAAACTTATGCTGCCTAAAAGGACTGGAAGAGCTTCTATGTGCACAATGACACCACGTCTTCCTTTACCCACTGCTTCTAGACGTAACTCACTGATTCCACTCCCAAGTGTGCCTAGCTTACCCCAGCTCCCATCACCATTACTACCAGCGCTAGCAAGTCGAGCTGATCAGAAAGAAATCAATGGTGAATTTGAAACCTGTTTGCCTGCACAGACTCATTGTGATAGTCCCAAAGGAATAAGAAGTGGGGGTAAGAAGATAGGAAGCATACTAAGGAGAAGTATCCATAAGAAAATTCAGACTAAGTCTCCAATCAGGCAACAAATGAGAAGGGTTGGTGTAAATGTAGGGATGGAGAAAGTTAGAGTCTCCATTGGAAGTCGAGGGAGAATGGCACACAGGGTGTTGCTGAAAAATGCTAGAAGAAATGGAACTGAAGAAATCCAGCAAACGAATAGTCGAAAGGAAAAGGAAAGGGGGTGGAATGCAGGAACGGTGGTGAAAACAGTCTTCTGA 3180 0.4314 MEDHNQWHPYDPLLLTDASLLQESSSLHSICKSSGPFLPIHPSLLEVRHDSKVSALSLDGPSWFNSYFIFDLADNSQTSLISGSSTMADPESQGSLINEFSCKRQGFDDNGVQFEDPVAKDVIDGRSILGYSLTSPDLVICAGSPDININSCLDSPELLESKSRQQVESPMELSLENGINGSEVDKAKKTPTVKFSNFCQTFKELSPEASFELLPPPAVNDESPQDYSPRDNELLEVMEVSQEAELVPSKDSGDSGGEEEIQKLKRDFEFQKKELAETRRVLEELKRENQQKSGECQEARKSLQELQNELMRKSMHVGSLAFAIEGQVKEKSRWFSTLRDLMRKVKIMKMEHIKLSEEVETYKNYLADMSQMGMTIKSKINEQLELHEDLKSKYIEGAKEQKELYNKVLELRGNIRVFCRCRPLNAVEITAGATMAIDFESAKDGELTVMSNGAPRKTFKFDDVFGPQADQADIFEGTAPFATSVLDGYNVCIFAYGQTGSGKTFTMEGTEEARGVNFRTLEKMFDIIKEREKLYRYDVSVSVLEVYNEQIRDLLVSANQPGIAARRLEIRQAGEGMHHVPGLVEAHVNNMTEVWEVLQTGGNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGEYTRSKLWLVDLAGSERVAKTEVQGERLKETQNINRSLSALGDVISALATKCPHVPFRNSKLTHLLQDSLGGDSKTLMFVQISPNENDLSETICSLNFASRVRGIELGPAKRQLDSTELLKYKQMAEKTKQEMKIKDLQIKKMEETIFGLDSKIKERDIKNKSLLDKVKELESQLLIERKLARQHVDSKIAEQQLHKHHEQNNAPMKPALANRSSARPLMENNLKPSLPFPAMDSSIKYIDHNEKENNPEIADKLMLPKRTGRASMCTMTPRLPLPTASRRNSLIPLPSVPSLPQLPSPLLPALASRADQKEINGEFETCLPAQTHCDSPKGIRSGGKKIGSILRRSIHKKIQTKSPIRQQMRRVGVNVGMEKVRVSIGSRGRMAHRVLLKNARRNGTEEIQQTNSRKEKERGWNAGTVVKTVF 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2260 1059 Gene3D Kinesin motor domain 409 782 IPR036961 -
Glsi04g2260 1059 Coils Coil 338 358 - -
Glsi04g2260 1059 Coils Coil 761 781 - -
Glsi04g2260 1059 SMART kinesin_4 412 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g2260 1059 Coils Coil 789 809 - -
Glsi04g2260 1059 ProSiteProfiles Kinesin motor domain profile. 414 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g2260 1059 PANTHER KINESIN-LIKE PROTEIN KLP-3 197 869 IPR027640 GO:0003777|GO:0007018
Glsi04g2260 1059 Coils Coil 261 316 - -
Glsi04g2260 1059 PRINTS Kinesin heavy chain signature 610 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g2260 1059 PRINTS Kinesin heavy chain signature 641 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g2260 1059 PRINTS Kinesin heavy chain signature 690 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g2260 1059 PRINTS Kinesin heavy chain signature 488 509 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g2260 1059 CDD KISc_C_terminal 412 742 - -
Glsi04g2260 1059 FunFam kinesin-like protein KIN-14R 359 742 - -
Glsi04g2260 1059 ProSitePatterns Kinesin motor domain signature. 640 651 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi04g2260 1059 Pfam Kinesin motor domain 420 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g2260 1059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 777 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2260 Glsi-ChrGlsi04 75271569 75276263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2260 389 767 Calmodulin-binding Proteins AT5G65930 42.670 2.09e-79 282