Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2231 ATGAAGGAAGGTGGTAGAAAACAAGGAGCAATATCTCCATGCGCAGCATGCAAGCTTCTTCGAAGGAGATGTGCGCAGGATTGCCTATTTGCCCCTTATTTCCCTGCGGATGAACCCCAGAAGTTTGCAAGCGTCCACAAGGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAACTACCAGAGCAGCAACGGAGTGATGCAGTGAGTTCAATGGTATATGAAGCAAATGCAAGGGTGAGGGACCCAGTGTATGGGTGTGTGGGAGCCATATCATCTCTGCAGCAACAAGTGGATGTGCTTCAAACCCAATTGGCACTTGCTCAGGCAGAGGTTGTGCATATGAGAATGCGCCAATTCACCACCACATCAGATCAGAACCCACCCTCCAATTCTCAGACCACCAAGTCCCTTTTTGCCATGGACGTGGGGGAGTCCTTATGATTGAGAGTTTGGGGGAGAGATTGGAGTGTAGAGGTGGGGTCATTAAAAAATAGAGAAAGTGAGGGATTGGGAACAAAAGGGTGGAGTTTAGAGGATGAGAGAAGGGGACAAAGCGACGAAAAGAGTAGTTTAAAGGAAAATAGAGAAGAAGATAGAGGAGGGAAGGATTTTAGTGGAGGCGAGAAGGGATTTGATATATGGGCTTGGATTTTGAAAATGGAAAAGTGGGTTGAGGTCTATGAGGAGAACTAA 699 0.4664 MKEGGRKQGAISPCAACKLLRRRCAQDCLFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMRMRQFTTTSDQNPPSNSQTTKSLFAMDVGESLXLRVWGRDWSVEVGSLKNRESEGLGTKGWSLEDERRGQSDEKSSLKENREEDRGGKDFSGGEKGFDIWAWILKMEKWVEVYEEN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2231 232 MobiDBLite consensus disorder prediction 120 139 - -
Glsi04g2231 232 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Glsi04g2231 232 Coils Coil 92 112 - -
Glsi04g2231 232 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Glsi04g2231 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 134 - -
Glsi04g2231 232 MobiDBLite consensus disorder prediction 170 210 - -
Glsi04g2231 232 MobiDBLite consensus disorder prediction 174 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2231 Glsi-ChrGlsi04 74997642 75004737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2231 1 123 AS2 family AT1G31320 86.992 1.39e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi04g2231 LOB 5.4e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g2231 04 74997642 75004737 Glsi04g2231 04 74997642 75004737 ECH