Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2230 ATGGCTTCTTCCTTCTCTCAATTCTATTCAAATTACACATTCCCTACTGATTTCGCCGAGTTTCCAGTGGCTGCGGAGAATGGCAATAGCTCAGTCATTAATCCTAATGACAACGGTGGTGCACTTGATCAAATTGTGCCACTTGATTGTGATGCCATCATGGCTTCGTCTTGGATTCCTTCTATTTTTTCTGATCAACAACTCGGGAGCATATCGGAGATGGCGATGCCAGCAAATATTGTTTCAGAGTGCAAACTGGGTAATTTTTATGGTGGCATTAATGGTGGTTTTCAGAATTTCAGTGGTGGTGTATACCGACCACATGTGGGTGAGTTTGCGGAAGAATGTCGTGGGTTTGTTGAGGATATTAAGCCACCTGCCTATCCTAATACTGCTTCAGAAAACTGGGGATATCAAGGTAATCAAATGGCAGCAGCTGAAGAACCAATCATAAAGGTAGGAAGATACTCGGAAGAAGAAAGGAAGGAAAGAATTCTACGATATTTGAAGAAAAGGAACCAAAGGAACTTCAACAAAACCATCAAGTATGCTTGTCGGAAAACCCTAGCTGATCGGAGAGTCAGAGTTAGGGGAAGGTTTGCAAGAAACAACGAGCTATGTGAGGATGAAATGGCAATGAAAAAGAATAAGAATCCTCACAAAGAGGACTTGTATGGTGGTGATTCTGTCCCATTTCAGTTAAAGAATGATGATGATGAAGAGGACTGGCTGCAAGAGGCCATGGCAAGTTTGGTGTATTTATCTCATTCTTCGCCTGATCGATGA 786 0.4224 MASSFSQFYSNYTFPTDFAEFPVAAENGNSSVINPNDNGGALDQIVPLDCDAIMASSWIPSIFSDQQLGSISEMAMPANIVSECKLGNFYGGINGGFQNFSGGVYRPHVGEFAEECRGFVEDIKPPAYPNTASENWGYQGNQMAAAEEPIIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEDEMAMKKNKNPHKEDLYGGDSVPFQLKNDDDEEDWLQEAMASLVYLSHSSPDR 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2230 261 ProSiteProfiles CCT domain profile. 161 203 IPR010402 GO:0005515
Glsi04g2230 261 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 104 216 IPR045281 GO:0009909
Glsi04g2230 261 Pfam CCT motif 161 203 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2230 Glsi-ChrGlsi04 74980335 74981742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2230 130 205 C2C2-CO-like Transcription Factor Family AT5G24930 35.526 3.45e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi04g2230 CCT 7.8e-17 CL0281