Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2216 ATGCCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTCACCAATACCCTTGGCTTTTCCACTTGCTGCTGCTGCTTGTGTCTTCCTGATCATCTGTTTGGTTGATGGAGTGGAAGCTCAAGCTGCAAACGCTACTACAGATCCTGCTGAAGCGAGAGCCTTGAATACGATCTTCAACAAATGGGGTAAATCGGCGTTGCCAAATATATGGAATATAAGCGGTGAATTATGCAGCGGAAGAGCCATAGACGACACAACCAAACCAGAAGACTACAACCCATTCATCAAATGCGATTGTTCCAATGGCACTATCTGCCACATTACTGCACTGAGGGTTTATGCATTGGATGTTGTTGGGGAAATCCCAGAAGAGCTATGGACTCTGACTTACCTCACCAATTTGAATATTGGCCAGAATCACTTGACGGGTTCTCTACCTCCAGCCATTGGAAATCTAACTCGCATGCAGTATCTGAGCGTGGGCATCAATGCTTTCTCGGGGGAACTTCCGAAGGAATTGGGTGATCTTACCGAGTTAATAGTATTGGGTTGCGGCTCAAACAGCTTCTCAGGTTCTCTGCCCCCCGAACTAGGAAATCTGGTGAAATTAGAACAACTCTACCTTGATAGTTCAGGACTTAGTGGTCAAATTCCTTCCACATTTGCTAATCTTACAAAGCTGGTGACAGTATGGGCTTCGGACATGGAGCTCACAGGCAGGATACCGGACTTTATAGGGAACTGGTCTAAACTGACAACCTTGAGGTTTCAGGGTAATTCTTTTGAAGGCCCAATCCCCTCATCACTTTCAAATCTGACTTCTCTTACAGAGTTGAGAATAAGTGAAATATCTAATGGGAGTTCCTCGCTGGCATTTATAAGGAATATGAAGTCTTTGACTGTCTTAGTACTGAGGAATAACAATATTTCTGATTCAATTCCATCCAATATCGGTGAATTTCAAAATTTGACCCAGCTGGACTTGAGCTTCAATAATATCATGGGACAGATTCCTGGATCACTTTTCAATCTGAGTTCACTCTCTTACTTGTTTCTTGGTAATAACAAACTCAGTGGTACTATCCCTACCCGGAGAAGTTCGTCTCTTGTCAACATCAATTTGGTTGCCAACAACTTGACTATAGAAAGCTCAAACAGCAGTGGTTTGTCTTCTGGACTCAACTGTCTGCAGCGAAATTTTCCCTGCAATCGTGGTACTGGAAGATATTATGACTTTGCAGTCAAGTGCGGCGGTCCTCAAATTACGTCGTCAAATGGAATTGTGTATGAAATGGATAATGACACACTTGGTCCTGCTACATATTTTGTTACTGATAAGCAAAGATGGGCAATTAGCAATGTTGGATTATTTACTGGGAACAGCAATCCTCTTTACAAAAGTTTTGTGTCTAATCAGTTCACTGGTACTGTGAATTCAGAGCTCTTCCAGACAGCGCGGCTCTCTGCTTCATCATTAAGGTATTATGGCCTAGGGCTTGAAAATGGGGATTACAACATCACCCTCCATTTTGCAGAAACATCTATTCTAGATTCTAGTACCACATGGAAAAGTCTTGGGAGACGGGTCTTTGATATATATATCCAGTTTGGGGAGACAAGAGAATGCTGCATAGCATATGAGTTTGAAGATGTGAAAAAAAAATTGCATGAGCTAGCTGGTGTTGATGATGATGATTTAAGAATGTCTTGGCCCATATATAATGCTGTGACTGGGTGA 1734 0.4268 MPPPPPPPSSSSPIPLAFPLAAAACVFLIICLVDGVEAQAANATTDPAEARALNTIFNKWGKSALPNIWNISGELCSGRAIDDTTKPEDYNPFIKCDCSNGTICHITALRVYALDVVGEIPEELWTLTYLTNLNIGQNHLTGSLPPAIGNLTRMQYLSVGINAFSGELPKELGDLTELIVLGCGSNSFSGSLPPELGNLVKLEQLYLDSSGLSGQIPSTFANLTKLVTVWASDMELTGRIPDFIGNWSKLTTLRFQGNSFEGPIPSSLSNLTSLTELRISEISNGSSSLAFIRNMKSLTVLVLRNNNISDSIPSNIGEFQNLTQLDLSFNNIMGQIPGSLFNLSSLSYLFLGNNKLSGTIPTRRSSSLVNINLVANNLTIESSNSSGLSSGLNCLQRNFPCNRGTGRYYDFAVKCGGPQITSSNGIVYEMDNDTLGPATYFVTDKQRWAISNVGLFTGNSNPLYKSFVSNQFTGTVNSELFQTARLSASSLRYYGLGLENGDYNITLHFAETSILDSSTTWKSLGRRVFDIYIQFGETRECCIAYEFEDVKKKLHELAGVDDDDLRMSWPIYNAVTG 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2216 577 Gene3D Ribonuclease Inhibitor 98 204 IPR032675 -
Glsi04g2216 577 Gene3D Ribonuclease Inhibitor 205 406 IPR032675 -
Glsi04g2216 577 FunFam Leucine-rich repeat transmembrane protein kinase 47 284 - -
Glsi04g2216 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 25 535 - -
Glsi04g2216 577 Gene3D - 409 540 - -
Glsi04g2216 577 Pfam Malectin domain 410 534 IPR021720 -
Glsi04g2216 577 SUPERFAMILY L domain-like 105 397 - -
Glsi04g2216 577 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 290 381 - -
Glsi04g2216 577 Pfam Leucine rich repeat 297 356 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2216 Glsi-ChrGlsi04 74685930 74695684 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2216 154 534 Receptor kinase-like Gene Family AT1G56120 56.824 7.30e-150 451