Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2206 ATGAAGCAGTTGATTCGCAGGCTTTCCCGAGTCGCCGACTCGTCTCAGTACACTCTGCTCCGATCTGACTCGCAGAACCGGCGACCGCGCCGGGCGGAGTCGTTCCGGGCATTGGCCGCGGCGAAAATCCGTCGGTCTCGCGTGAGGACGACGGCTGCAGTGCCGGAAGGTCACGTGCCGATCTACGTAGGGGATGAGATGGAGAGGTTCGTAGTGAGCGCGGAGCTGTTGAACCATCCGATCTTCGTGAAGCTTTTGAACAGATCGGCGCAGGAGTACGGGTACGAGCAGAAAGGCGTGCTCCGGATTCCCTGCCATGTCTTCGTGTTTGAGCGCGTGCTTGAAGCGCTACGTCACGGTCACGGCGACACGCGCGACATCCAGGACCTGCTCAATTCTTCCTCCGAAGAGTTTTGCTAG 420 0.5976 MKQLIRRLSRVADSSQYTLLRSDSQNRRPRRAESFRALAAAKIRRSRVRTTAAVPEGHVPIYVGDEMERFVVSAELLNHPIFVKLLNRSAQEYGYEQKGVLRIPCHVFVFERVLEALRHGHGDTRDIQDLLNSSSEEFC 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2206 139 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 113 IPR003676 GO:0009733
Glsi04g2206 139 Pfam Auxin responsive protein 8 117 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2206 Glsi-ChrGlsi04 74414246 74414665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2206 51 137 Calmodulin-binding Proteins AT4G31320 39.326 3.55e-17 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g2206 04 74414246 74414665 Glsi04g2206 04 74414246 74414665 ECH