Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2194 ATGAACCATCTCTGCTTCGATGTCTACCAATGTAAATTAAGAGTTATTCTGGAATTAGAAGAAACAAACAGGTGGTGCACATATATGGTTTATATCTGGGTTTTTTTTTCTTCTGCAATTTTCTTGTGGATTCCTACGTATTCTCGCCTTATAAGACTCGACCCTGTTTCTGTGAATGTCTGCTCTTGTGCTTCTCAGGCACAAAATCCAAAATCAATTGGTTGGGCTCCTATTGTGATGGCTTCTTCTCTAACTGGGACTAGAGCTGCGTATGCAACACAATCGGTTCCTACAAATGAACCAGTTGTTTCTGTGGGTTGGCTATATGCTAACCTTAAGCAGCCTGATATGAAGGTGCTGGATGCATCCTGGTACATGCCAGATGAGCAGAGGAACCCAATTCAAGAATATCAGGTTGCTCACATTCCTGGGGCCCTTTTCTTTGACATTGATGAAATAGTGGATCGGACTACAAATTTGCCGCACATGTTGCCATCAGAGGAAGCTTTTGCTGCTGCTGTTTCCACTCTTGGTATAGAGAACAAGGATGGAGTGGTTGTTTATGATGGGAAAGGATTATTTAGTGCAGCTCGTGTTTGGTGGATGTTCAAAGTGTTTGGGCATGACAGAGTTTGGGTATTAGATGGTGGACTGCCAAGATGGCGTGCATCAGGATATGATGTTGAATCTAGTGCTTCAAGTGATGCTATATTAAAAGCCAGTGCTGCGACTGAGGCAATAGATAAAGTATATCAAGGACAATCAGTTGGTCCAATCACATTTCAGACTAAATTGCAGCCACATTTTGTTTGGTCCCTTGAGCAGGTAAAGAGAAACATTGTGGAAAAAAGTTACCAACACATAGATGCGCGATCAAAGCCCAGGTTTGATGGAGCTGCACCAGAGCCCCGAAAGGGGATAAGAAGTGGCCATATACCTGGGAGCAAGTGCATTCCTTTTACCGAGTTGTTGGATGCTTCGCAGATGCTGTTACCAGCAGATGAGCTTAAGAAGCGATTTGATCAAGAAGGGATCTCTTTGGATTGCCCAGTTGTGGCTTCATGTGGCACTGGGGTAACTGCTTGCAATCTTGTATTGGGTCTCCATCGTCTTGGTAAGTCTGATGTTGTTGTCTATGATGGATCTTGGACTGAATGGGCAACACAATCTGAGACACAACTTGTAACTTCATGA 1194 0.4347 MNHLCFDVYQCKLRVILELEETNRWCTYMVYIWVFFSSAIFLWIPTYSRLIRLDPVSVNVCSCASQAQNPKSIGWAPIVMASSLTGTRAAYATQSVPTNEPVVSVGWLYANLKQPDMKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDIDEIVDRTTNLPHMLPSEEAFAAAVSTLGIENKDGVVVYDGKGLFSAARVWWMFKVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAATEAIDKVYQGQSVGPITFQTKLQPHFVWSLEQVKRNIVEKSYQHIDARSKPRFDGAAPEPRKGIRSGHIPGSKCIPFTELLDASQMLLPADELKKRFDQEGISLDCPVVASCGTGVTACNLVLGLHRLGKSDVVVYDGSWTEWATQSETQLVTS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2194 397 Gene3D - 95 237 IPR036873 -
Glsi04g2194 397 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 99 232 IPR036873 -
Glsi04g2194 397 ProSiteProfiles Rhodanese domain profile. 281 395 IPR001763 -
Glsi04g2194 397 Gene3D - 267 396 IPR036873 -
Glsi04g2194 397 SMART rhod_4 103 227 IPR001763 -
Glsi04g2194 397 SMART rhod_4 271 392 IPR001763 -
Glsi04g2194 397 FunFam Sulfurtransferase 266 397 - -
Glsi04g2194 397 ProSitePatterns Rhodanese signature 1. 137 148 IPR001307 GO:0004792
Glsi04g2194 397 CDD TST_Repeat_1 102 225 - -
Glsi04g2194 397 PANTHER THIOSULFATE SULFERTANSFERASE 96 396 IPR045078 GO:0016783
Glsi04g2194 397 CDD TST_Repeat_2 272 387 - -
Glsi04g2194 397 ProSiteProfiles Rhodanese domain profile. 113 230 IPR001763 -
Glsi04g2194 397 FunFam Sulfurtransferase 95 237 - -
Glsi04g2194 397 ProSitePatterns Rhodanese C-terminal signature. 376 386 IPR001307 GO:0004792
Glsi04g2194 397 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 274 394 IPR036873 -
Glsi04g2194 397 Pfam Rhodanese-like domain 273 387 IPR001763 -
Glsi04g2194 397 Pfam Rhodanese-like domain 105 223 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2194 Glsi-ChrGlsi04 74260694 74273569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2194 80 391 Sulfurtransferasese or Rhodanese AT1G79230 77.244 0.0 521