Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2193 ATGGCATTGACCACGTACTTCAATTGGGACACTTTTCAAGCTGATGTGAACCCAGAAGCAAGTATCTTCCATGAAGCAACACCAGAAGAACTAGCAGTACTAGACAACCTTCTTGATGAAAATTGCTACCTTCCAAACACCTTCGTTGGCTCCTCGTATCTTGATCCACCCACTTTTCTCTACCCTCCTCAGCTTCTTCCGAACACTTCTCCGTATGACCATTTTGAGATTTTCGATCAAAACCAGCTCCTTCCATGCCCAAAACGCCAGAAGTACTGCTATGAGAACCAAATGGAATTCCCGGAAGTCGTCTTCTCCGCCATGCCAGATCAGTTCAAATTTCCAGAGGGTGGAAGTAGAAATAATATTGTTGAAAAGAAAAGTAGTGGAAAGAGTGTGTCTGCGCAGAGCAAAGCAGCGAGAGAAAGGAGGAGGAAGATCACACAGAAGACGCAAGAACTAGGGAGACTGGTTCCTGGTGGGTGTAAGATGAACACAGCTGAGATGCTTCATGCAGCGGCCAAGTATGTCTCTTACTTGAAAGCCCAAGTTGGGATGCTTCAACTCATGAACACACTAGAGGAAGATAAGGCATACTCCAGTCAAACTGAAGATCTGGAGGCCCTGCTTGCCTCACCCTACGTTGAAGAAAAGCTGTGCTTGGAGGAAAAGTGCTTTGTTCCAAAGGAGCTCGTCACCACCTTGGCAAATCGCCATGGTCTTCTTTCAAGACCTTCGCTCCTTAAAGACCTTAATCAGTTAATTGGGACAGACGTTGAGGAGAAGAAGAAAGAACAGCAACTATAA 807 0.4572 MALTTYFNWDTFQADVNPEASIFHEATPEELAVLDNLLDENCYLPNTFVGSSYLDPPTFLYPPQLLPNTSPYDHFEIFDQNQLLPCPKRQKYCYENQMEFPEVVFSAMPDQFKFPEGGSRNNIVEKKSSGKSVSAQSKAARERRRKITQKTQELGRLVPGGCKMNTAEMLHAAAKYVSYLKAQVGMLQLMNTLEEDKAYSSQTEDLEALLASPYVEEKLCLEEKCFVPKELVTTLANRHGLLSRPSLLKDLNQLIGTDVEEKKKEQQL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2193 268 Gene3D - 130 206 IPR036638 GO:0046983
Glsi04g2193 268 SMART finulus 137 186 IPR011598 GO:0046983
Glsi04g2193 268 Pfam Helix-loop-helix DNA-binding domain 136 181 IPR011598 GO:0046983
Glsi04g2193 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 131 180 IPR011598 GO:0046983
Glsi04g2193 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 191 IPR036638 GO:0046983
Glsi04g2193 268 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 127 229 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2193 Glsi-ChrGlsi04 74256169 74259204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2193 131 259 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 47.287 3.42e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi04g2193 HLH 1.4e-05 No_clan