Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2186 ATGGAACCTAGAAATGAGGAATTGCAGGCTGCATCACAGTTAGTAATGCAGGACCATCTGGATTCCATGCATACTAGTAGAATACCTTCTCCTCTTAATACACCAGAGGTTAAACCTGTACTTAATTACTCCATACAGACTAGTGAGGAATTTGCTCTCGAATTTATGCGAGATAGGGTAAATCTCAGGAAGCCTGTAATTTCAAATGTTGATGATCCCAATTGTACAACAGGTTATATAAAACTGAAAGACATTCTAGGCATCAGTCATGCAGGATCTGAAAGTGGATCAGATATTTCTATGCTCTCAATGGTTCCAAAAGACTTTGGTGGTAGAATATTACCACGACCGAGTGATGGAAAGCTAAGGTATGTTGGAGGCGAAACATACATGATCCGTATAAGAAAGGACATATCTTGGCAAGAGCTTATGTATAAAGCATTGCCAATCTATAATCAAGCTCATCTACTTAAGTATCAGCTTCCTAGGGAAGAGCTTGATGCCTTGGTATTTGTGTCATCTGATGAGGATTTGCAAAATATGGTGGAGGAATATAATCATCTAGACAATAAAGAAGGATCACAATAG 588 0.3861 MEPRNEELQAASQLVMQDHLDSMHTSRIPSPLNTPEVKPVLNYSIQTSEEFALEFMRDRVNLRKPVISNVDDPNCTTGYIKLKDILGISHAGSESGSDISMLSMVPKDFGGRILPRPSDGKLRYVGGETYMIRIRKDISWQELMYKALPIYNQAHLLKYQLPREELDALVFVSSDEDLQNMVEEYNHLDNKEGSQ 195
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2186 195 PANTHER OS05G0427100 PROTEIN-RELATED 109 189 - -
Glsi04g2186 195 CDD PB1_UP2 109 188 - -
Glsi04g2186 195 Gene3D - 121 194 - -
Glsi04g2186 195 SMART PB1_new 117 191 IPR000270 GO:0005515
Glsi04g2186 195 Pfam PB1 domain 119 188 IPR000270 GO:0005515
Glsi04g2186 195 SUPERFAMILY CAD & PB1 domains 118 190 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi04g2186 Glsi-ChrGlsi04 73792466 73793218 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2186 33 195 MAP Kinase Kinase Kinase AT1G16270 42.857 3.00e-42 149