Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2180 ATGGCTAAGGATGATCAGTTGCAGGTTCTTAAGGCACTTGACGCTGCCAAAACACAATGGTACCACTTTACAGCAATAGTGATTGCCGGGATGGGTTTCTTCACTGATTCTTATGATCTGTTCTGCATCTCCCTTGTGACCAAACTACTTGGCCGCTTGTATTACTACAAGGAAGGCTCTAACGAACCTGGTTCTCTGCCTTTCAACGTTTCTGCAGCCATTAATGGCGTTGCCTTCTGTGGCACCCTTGTGGGTCAGCTCTTCTTCGGTTGGCTTGGTGACAAGATGGGTAGAAAACGCGTCTACGGTATAACCCTAATGCTCATGGTGGTTTCTTCCATTGCCTCTGGCCTCTCTTTTGGGAAAGACCCCAAAGCTGTTATGGCTACCCTTTGCTTCTTCCGTTTCTGGCTTGGCTTTGGCATTGGTGGAGACTACCCTCTCTCTGCCACCATCATGTCTGAGTATTCCAGCAAGAAGACTCGTGGAGCTTTCATAGCTGCAGTTTTTGCCATGCAAGGGTTTGGGATTCTGGCTGGTGGCACGGTTGCAATCATAGTCTCAGCAGCTTTCAAAGCTTACTATCCTGCTCCTGCATATCAAGTTAACCCAGTTTTATCCACAGTCCCAGAAGCCGATTACGTGTGGAGGATCATTTTGATGTTTGGTGCTGTCCCTGCTCTACTCACTTACTATTGGAGGATGAAGATGCCTGAAACTGCAAGATACACTGCCTTGGTTGCCAAAAATGCCAAGCAAGCAGCTTCAGATATGTCAAAAGTTTTGAAAGTTGAGATTGAAGCAGAAAGTGAGAAAATTGAGCAATTTGCAAGAGAAGCAGAGAACCAATTTGGCTTATTCTCGAACCAGTTCCTTCATCGCCATGGGCTTCACTTGCTTGGAACCACCACTACTTGGTTCCTTTTGGATATTGCCTTTTACAGCCAGAACTTGTTCCAGAAAGATATCTTCAGTGCAATCGGATGGATTGCAGATGCCAAAACCATGAATGCCATTGAAGAAGTTTACAAGATCGCCAGAGCACAGACACTCATAGCCCTTTGCAGCACCGTCCCTGGTTACTGGTTCACAGTGGCACTCATTGATAGGATTGGAAGGTTTAAAATCCAGGTGATGGGATTCTTCTTCATGACCGTGTTCATGTTTGGCTTAGCTATTCCATACCACCACTGGACTTTGAAGGGCAACCAAATTGGGTTTGTTGTAATGTACTCGTTTACCTTCTTCTTCTGTAATTTTGGTCCAAATGCCACAACTTTTGTGGTCCCGGCAGAGATTTTCCCAGCAAGGTTAAGGTCTACATGCCATGGCATCTCAGCTGCAGCAGGAAAGGCTGGGGCAATAGTGGGCTCTTTTGGCTTCCTTTATGCTCAAAATGCCATTGGAGTGAGATATACTCTGATAATTTTGGGTGTGATCAACTTCTTGGGGTTGCTATTTACAGGTTTGGTGCCAGAACCAAAAGGAAAATCACTAGAGGAGATGTCTGGTGAAGCCCCAGAAGAGACTACAGATGCTAAAGATCCTAGAGATATTATTTAA 1563 0.4549 MAKDDQLQVLKALDAAKTQWYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRLYYYKEGSNEPGSLPFNVSAAINGVAFCGTLVGQLFFGWLGDKMGRKRVYGITLMLMVVSSIASGLSFGKDPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYSSKKTRGAFIAAVFAMQGFGILAGGTVAIIVSAAFKAYYPAPAYQVNPVLSTVPEADYVWRIILMFGAVPALLTYYWRMKMPETARYTALVAKNAKQAASDMSKVLKVEIEAESEKIEQFAREAENQFGLFSNQFLHRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIADAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRFKIQVMGFFFMTVFMFGLAIPYHHWTLKGNQIGFVVMYSFTFFFCNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGSFGFLYAQNAIGVRYTLIILGVINFLGLLFTGLVPEPKGKSLEEMSGEAPEETTDAKDPRDII 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2180 520 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 22 494 - -
Glsi04g2180 520 Gene3D MFS general substrate transporter like domains 21 518 IPR036259 -
Glsi04g2180 520 NCBIfam phosphate:H+ symporter 11 505 IPR004738 GO:0005315|GO:0006817|GO:0016020
Glsi04g2180 520 CDD MFS_PhT 26 495 - -
Glsi04g2180 520 MobiDBLite consensus disorder prediction 497 520 - -
Glsi04g2180 520 SUPERFAMILY MFS general substrate transporter 11 503 IPR036259 -
Glsi04g2180 520 Pfam Sugar (and other) transporter 26 503 IPR005828 GO:0016020|GO:0022857|GO:0055085
Glsi04g2180 520 MobiDBLite consensus disorder prediction 498 520 - -
Glsi04g2180 520 Coils Coil 259 283 - -
Glsi04g2180 520 FunFam Inorganic phosphate transporter 1-6 21 517 - -
Glsi04g2180 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 25 496 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2180 Glsi-ChrGlsi04 73699108 73700670 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2180 5 504 Inorganic Solute Cotransporters AT2G38940 77.583 0.0 827