Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2179 ATGGAACCTAGAAATGAGGAATTTCAGGCTGCATCACAGTTAGTAATGCAGGACCATCTGGATTCCATGCATACTAGTAGAATACCATCTGATCTTAATACACCAGAGGTTAAACCTGTACTTAATTACTCCATACAGACTGGTGAGGAATTTGCTCTCGAATTTATGCGAGATAGGGTAAATCTCAGGAAGCCTGTATTTTCAAATGTTGATGATCCCAATTGTACAACAGGTTATATAAAACTGAAAGACATTCTAGGCATCAGTCATGCAGGATCTGAAAGTGGATCAGATATTTCTATGCTCTCAATGGTTCCAAAAGAGTTTGACAAGAAGAACACATCATTACATGGAGATAGAAGCAATTATGGATCAATTCGATCAATACCAGGAACCTCATTTAATCAGGACAATAGTCGATTTGTGCATGGTTATGCCTCTTCGGGGGGCTCTGATAGCTCATCAATGACAATGAAAGTTCTTTGCAGCTTTGGTGGTAGAATATTACCACGACCGAGCGATGGAAAGCTAAGGTATGTTGGAGGCGAAACACGCATGATCCGTATAAGAAAGGACATATCTTGGAAGGAGCTTATGTATAAAGCATTATCAATCTATAATCAAGCTCATCTACTTAAGTACCAGCTTCCTGGGGAAGAGCTTGATGCTTTGGTATCTGTGTCATCTGATGAGGATTTGCAGAATATGGTGGAGGAATATAATCATCTAGACACTAAAGAAGGATCACAAAAGCTTAGAGTGTTTTTGTTCTCAATGGGTGATTTGGAGGATGCTCAGTTTGGTCTTGGTAGTATGGGTGATGATTCTGAGATCCAATATGTTGTTGCTGTTAATGGCATGGACTTGGGATCAAGAAACAACTCAACTCTTCTTGGTGTGAGCCCTTTGGCTAATAATTTACATGAATTGGATGGGCAAAATATTGAGAGGGAGACTACTAGAATTGCTGTGGAATCTATAGGTATCAGCAATGCTCCCTTGACTGGCAAATTGGACTCGTCATTAACTATTCAGTCTTCACAACCAATGGCACCAGCTTCCTCAAATGCTTATGAAACCTATCCACTGTTTTATGTTGATCAGATGGTGTGCCTTGGGGAAACCATTAGTCAATATCCGATTCACCAAGGCCTTAATCCTTCTCAGAACCCTGCACTTGGAGAGATTCCTATTCCTCCTTATGGGATGATTAATCAACCAGGGATTTTAAATGAAGGCCATTTACCTAGTGGATTACAAGTGCAGAACCCCGAAATACCAGCAATGCAGGTGAAGAAAATGGGTAATAGTTCAGTTCAACAAGGAAGTATCCCTGGCAAAGTTTCAGCCTTGGAAACACCATCCCCTGTTCCCTCACCGCCATTTGATGGTTACTTGAAAAATAATTTTCCAGAAACATCAGTAGCATTTATTGTACAAGAGGGGCATCTACCTTCATCGCCTTCAACCAAAAAGGACCAGCACCAGGATTATGAGGAGGCTTCTTCTACATCTAGCAGTGCATTTGGTCCTGCTTATGTTGATTCCCAGTCCAGTGCATATGATTTGAGTTGGCTTCACCCTCCACCACTTCCAAAGAGAATTTACTATTCAGAAAGAACTCCCAGGGAGCCAGTAGAGCTGCTGAATCGGTCCTCAAAGTCAGATGATACACAGGGTTCTCAGTTTCTTGTGTCAGATTTTCTTTCTGATGTCAATCTGCAGAGTTCAGTTACAGAATCTCATGACAACTTGCATGATGGAAATCAGCCTAGTCCAACTGATGAATTGAGCACTGCAGCAAATCCCTTGCATGCAGATGGTCGCAGCATTGAAAATGGATTTGTGAGACCACAAATATATGAGCCTGAGGCAAGTAGTCAGACAAAATTAAGGCTATCAGAACATGTGGATCTTGAATTGAAGCAGGTATTACTAAACAATGAAGGAAGTGAAGACATGGTGAATGAGGATCAGGTTAATAGGTCAGAAACTGACAGTTGTTGTAAAGATAACCATAATAAGCCTCTGCTAGATGAAACCAAAAACAATAAACTAGAACTTCCTTCGTCGCACAAGGTTCCCTCTGTCAAGCAGCATGATGATCTGTCATCTAATCTTCCAGAGATTAATTGGGGTGACACCTCTGGGAAGGAATCCAACAACAATTGTGTGGTGCAAACTCTAACTGTTTCCTTAACTGGGAACACAACCAAAGATATTTCTCAAGATTTGCCCTCAGATGCTGTTTCCAAACAAGCACAAGGTGATATTCTCATTGATATTGAAGATCGATTTCCACGTGACTTGCTTTCTGATATGTACTCTAAAGCAACACTTGCAGAAGATTCCTCCAGTCAACTTCCACTAACTAGGGATGGAGTGGGAGTAAGCATAAACGTGGAAAATCCAGAGCCTAAACGATGGTCTTTTTTTACTAAATTGGCACAAGGAGGGCTTGATAATGTGTCTCTTATCGACCAAGATCATCTTGCTTTTTCACCTGCAATAGGGGATGAAGCCGGGGATGATAAAATCCACCTGGTTCCACCTCTAACAACTGATGGAGTTTCTATAGACCCTGTGGATTCCCATCCCAATTTTGGTGAAGAAAATCAGAAAGACTTGGGTGGAATGATTGGAGTGGAAGCCACTGTACTGCAGTCACATTATGGTCATTCCCAAATGAAGGACACAGAAAGCATGCAGTTTGATGCTATGGTGGGAAATATAAGAGCACAAGAATCAGAATATGAGGATGTGAAGTTTGAAACAAGAAATAGTAGTCTACCTCCTCTCGATCCTTCTTTAGGAGATTTTGATATCAGTACCTTGCAGGTCATAAAGAATGAAGATCTTGAAGAGTTGAAGGAATTGGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGCGGGGAACAGATGTTGCCATTAAAAGAATAAAGAAAAGCTGCTTCACTGGTCGATCATCTGAACAAGAGAGACTGACTGTAGAGTTCTGGAGGGAAGCTGACATACTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTGGTCCAGGATGGACCAGGAGGAACGATGGCCACCGTTACTGAGTTCATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGGAAGAGACTGATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTGCACTCTAAAAATATTGTGCATTTCGACTTAAAATGTGACAATTTACTTGTGAACATGAAAGATCCTTTGCGGCCAATATGCAAGGTTGGGGATTTTGGCTTGTCAAAAATTAAACGAAATACCTTGGTCTCTGGTGGTGTGCGGGGGACCCTACCTTGGATGGCACCAGAGCTGCTGAATGGAAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTTTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACGGGTGAAGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATAGTAAATAATACATTAAGGCCAACAATCCCAAGCTTTTGTGATTCTGAATGGAGAACACTAATGGAGCAATGTTGGGCACCCAATCCTGCAGCCAGGCCATCCTTCACAGAAATTGCTAGTCGCTTGCGTGTGATGTCTGCAGCAGCTAGCCAAACCAAAGCACAAGGCCAAAAGGCATCTAAATGA 3708 0.4183 MEPRNEEFQAASQLVMQDHLDSMHTSRIPSDLNTPEVKPVLNYSIQTGEEFALEFMRDRVNLRKPVFSNVDDPNCTTGYIKLKDILGISHAGSESGSDISMLSMVPKEFDKKNTSLHGDRSNYGSIRSIPGTSFNQDNSRFVHGYASSGGSDSSSMTMKVLCSFGGRILPRPSDGKLRYVGGETRMIRIRKDISWKELMYKALSIYNQAHLLKYQLPGEELDALVSVSSDEDLQNMVEEYNHLDTKEGSQKLRVFLFSMGDLEDAQFGLGSMGDDSEIQYVVAVNGMDLGSRNNSTLLGVSPLANNLHELDGQNIERETTRIAVESIGISNAPLTGKLDSSLTIQSSQPMAPASSNAYETYPLFYVDQMVCLGETISQYPIHQGLNPSQNPALGEIPIPPYGMINQPGILNEGHLPSGLQVQNPEIPAMQVKKMGNSSVQQGSIPGKVSALETPSPVPSPPFDGYLKNNFPETSVAFIVQEGHLPSSPSTKKDQHQDYEEASSTSSSAFGPAYVDSQSSAYDLSWLHPPPLPKRIYYSERTPREPVELLNRSSKSDDTQGSQFLVSDFLSDVNLQSSVTESHDNLHDGNQPSPTDELSTAANPLHADGRSIENGFVRPQIYEPEASSQTKLRLSEHVDLELKQVLLNNEGSEDMVNEDQVNRSETDSCCKDNHNKPLLDETKNNKLELPSSHKVPSVKQHDDLSSNLPEINWGDTSGKESNNNCVVQTLTVSLTGNTTKDISQDLPSDAVSKQAQGDILIDIEDRFPRDLLSDMYSKATLAEDSSSQLPLTRDGVGVSINVENPEPKRWSFFTKLAQGGLDNVSLIDQDHLAFSPAIGDEAGDDKIHLVPPLTTDGVSIDPVDSHPNFGEENQKDLGGMIGVEATVLQSHYGHSQMKDTESMQFDAMVGNIRAQESEYEDVKFETRNSSLPPLDPSLGDFDISTLQVIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNMKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSFCDSEWRTLMEQCWAPNPAARPSFTEIASRLRVMSAAASQTKAQGQKASK 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2179 1235 MobiDBLite consensus disorder prediction 433 465 - -
Glsi04g2179 1235 MobiDBLite consensus disorder prediction 483 511 - -
Glsi04g2179 1235 Gene3D - 176 259 - -
Glsi04g2179 1235 PRINTS Tyrosine kinase catalytic domain signature 1143 1165 IPR001245 GO:0004672|GO:0006468
Glsi04g2179 1235 PRINTS Tyrosine kinase catalytic domain signature 1035 1048 IPR001245 GO:0004672|GO:0006468
Glsi04g2179 1235 PRINTS Tyrosine kinase catalytic domain signature 1187 1209 IPR001245 GO:0004672|GO:0006468
Glsi04g2179 1235 PRINTS Tyrosine kinase catalytic domain signature 1072 1090 IPR001245 GO:0004672|GO:0006468
Glsi04g2179 1235 MobiDBLite consensus disorder prediction 655 679 - -
Glsi04g2179 1235 CDD STKc_MAP3K-like 959 1216 - -
Glsi04g2179 1235 PANTHER SERINE-THREONINE PROTEIN KINASE 207 1217 - -
Glsi04g2179 1235 SUPERFAMILY CAD & PB1 domains 173 262 - -
Glsi04g2179 1235 CDD PB1_UP2 161 257 - -
Glsi04g2179 1235 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 946 1040 - -
Glsi04g2179 1235 SMART PB1_new 172 259 IPR000270 GO:0005515
Glsi04g2179 1235 Pfam PB1 domain 174 257 IPR000270 GO:0005515
Glsi04g2179 1235 MobiDBLite consensus disorder prediction 650 679 - -
Glsi04g2179 1235 ProSiteProfiles Protein kinase domain profile. 953 1218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g2179 1235 ProSitePatterns Protein kinases ATP-binding region signature. 959 984 IPR017441 GO:0005524
Glsi04g2179 1235 SMART serkin_6 953 1219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g2179 1235 MobiDBLite consensus disorder prediction 579 609 - -
Glsi04g2179 1235 MobiDBLite consensus disorder prediction 579 599 - -
Glsi04g2179 1235 MobiDBLite consensus disorder prediction 433 448 - -
Glsi04g2179 1235 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 177 259 - -
Glsi04g2179 1235 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1078 1090 IPR008271 GO:0004672|GO:0006468
Glsi04g2179 1235 Pfam Protein tyrosine and serine/threonine kinase 954 1216 IPR001245 GO:0004672|GO:0006468
Glsi04g2179 1235 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1041 1233 - -
Glsi04g2179 1235 Gene3D Phosphorylase Kinase; domain 1 946 1040 - -
Glsi04g2179 1235 Gene3D Transferase(Phosphotransferase) domain 1 1041 1235 - -
Glsi04g2179 1235 SUPERFAMILY Protein kinase-like (PK-like) 942 1215 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2179 Glsi-ChrGlsi04 73684218 73691616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2179 1 1145 MAP Kinase Kinase Kinase AT1G79570 42.822 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Glsi04g2179 PK_Tyr_Ser-Thr 2.4e-62 CL0016