Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2159 ATGCAACCTGTGGCTCAACCAGAAAGGGATCCAGTGAAAGAAAAATGGATGATAGGGATAATGATTTCGGCCACATTGGTAAAGGTTGCCCTAATGACTTATTGTCGCAGGTTCAAGAACGAAATAGTGAGGGCCTATGCTCAGGACCATTTCTTTGATGTCATTACCAACTCAATTGGTCTTGCCGCAGCAGTTTTAGCCATCAAATTCTTCTGGTGGCTTGACCCTCTTGGAGCCATCTTGGTTGACATTGTACTCCCACAAGACATGCCTCTTGCTCAAGCTCATGACATCGGAGAAACTCTCCATGATAAACTTGAAAATCTGCCCGAAATTGAGAGAGCTTTTGTTCATGTTGATTTGGACATTACTCATAAGCTAGAGCACAAATCAAAGATGTTATAA 405 0.4247 MQPVAQPERDPVKEKWMIGIMISATLVKVALMTYCRRFKNEIVRAYAQDHFFDVITNSIGLAAAVLAIKFFWWLDPLGAILVDIVLPQDMPLAQAHDIGETLHDKLENLPEIERAFVHVDLDITHKLEHKSKML 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2159 134 Gene3D Cation efflux protein transmembrane domain 2 87 IPR027469 -
Glsi04g2159 134 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 12 82 - -
Glsi04g2159 134 SUPERFAMILY Cation efflux protein transmembrane domain-like 11 84 IPR027469 -
Glsi04g2159 134 Pfam Cation efflux family 9 83 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Glsi04g2159 134 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 72 120 IPR036837 -
Glsi04g2159 134 Pfam Dimerisation domain of Zinc Transporter 81 120 IPR027470 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2159 Glsi-ChrGlsi04 73462082 73463209 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g2159 04 73462082 73463209 Glsi04g2159 04 73462082 73463209 ECH