Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2136 ATGCTCTTCATGCCCTCGAGCAGAGGTTGTGATGCATCCATTCTTATAGACCCAGCTGGGAGTAACAGGGCAGAGAAAGAGGCAGGCCCAAACAGGAGCGTTCGAGGATATGATCTGATCGATGAGGTGAAGGAAAGGCTTGAAGATGCATGCCCTTCCACAGTGTCCTGTGCTGATATCATAACAATGGCCACTAGAGATGCTGTTGCTTTATCTGGAGGTCCCGATTATGAGGTTCCCACAGGCAGACATGATGGACTAATCTCTGATATGAATGAAGCGCTCGAATTGGCTAGAGCAGGGGACGCTGTGTCCACGGCGTCGCAATTCTTTGCTAGAAAGGGAATAACAAAAGAAGAAATGGTGACCCTTCTGGGTGCACATACAGTTGGTACTTTGGAACGAAAGACACCCTTTATAGTTGATAACGAATTCTACAAGGAAATTCTTCTCAACAGAGCCATTCTGCCTCTTGATCAGAACCTCGCTTTAGATCCGTCTACAAGGGGCTTTGTCACTAGTTTTGCATCCAGCAATGACAAATTCGAGAAGAGTTTCGCCAATGCTATGATAAAGATTGGAAAGATTGAAGTTCTCGTTGGCGAAGCTGGAGATATTCGCAAGAAATGCAGTGTTTTTAATGCTTCTCCTTCTCCTTCACCTTCTCCTTCTCCCAATTAA 681 0.4567 MLFMPSSRGCDASILIDPAGSNRAEKEAGPNRSVRGYDLIDEVKERLEDACPSTVSCADIITMATRDAVALSGGPDYEVPTGRHDGLISDMNEALELARAGDAVSTASQFFARKGITKEEMVTLLGAHTVGTLERKTPFIVDNEFYKEILLNRAILPLDQNLALDPSTRGFVTSFASSNDKFEKSFANAMIKIGKIEVLVGEAGDIRKKCSVFNASPSPSPSPSPN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2136 226 ProSitePatterns Peroxidases proximal heme-ligand signature. 120 130 IPR019793 -
Glsi04g2136 226 Gene3D Peroxidase, domain 2 134 193 - -
Glsi04g2136 226 Gene3D - 8 97 - -
Glsi04g2136 226 PRINTS Plant peroxidase signature 54 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g2136 226 PRINTS Plant peroxidase signature 119 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g2136 226 PRINTS Plant peroxidase signature 35 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g2136 226 PRINTS Plant peroxidase signature 73 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g2136 226 Gene3D - 194 214 - -
Glsi04g2136 226 ProSiteProfiles Plant heme peroxidase family profile. 8 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g2136 226 Pfam Peroxidase 8 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g2136 226 PRINTS Haem peroxidase superfamily signature 120 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g2136 226 PRINTS Haem peroxidase superfamily signature 55 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g2136 226 PRINTS Haem peroxidase superfamily signature 73 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi04g2136 226 PANTHER - 133 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi04g2136 226 SUPERFAMILY Heme-dependent peroxidases 8 214 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi04g2136 226 Gene3D Peroxidase, domain 2 98 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2136 Glsi-ChrGlsi04 73155067 73156358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2136 8 214 Peroxidase AT4G26010 47.951 7.03e-70 215