Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2048 ATGGCCAAGTGGAAGAACAACGCTAGGAAGTTGTCCTACATCTCAGTTCCATCTCAGATAATCAATTCTATATCATCTTCTTCCCTACAATCTCTGCTTGACTCCCCCAAGAAATCTTCAAGGAATCACAGCAGGTTCTTTAGCTTCTTCACCAACTACAGGAGCCCAAGACTCTGGTTTTTCACTCTCTTTCTCTTTGGTTTCCTTGGCATGCTCAAGTTTGGGTTCAACATCGATGTCCCATTTTCTCCCTACCCATGTGTTACATCTCAACCCCAGCTCCCAATCGCAAATGGGCATTCAAAATCCGAACTTGGGGTTGCCTTACAGAAGGGAAAACCAGTTGAAAATGACCAGAAAAATGGGGTTTTTAATGGTACTAATTCTCACCCTTTGATAGCCAATGTGCAATTAAAAGCATTAGACAAGGAGGAAACCGATGAGGAAGTTGAGAAGAGCGAGTTTTGGAAGCAACCAGATGGGTTGGGGTACAAACCTTGCTTGGTTTTCACCAGGGATTATAGGAGACAAACTGAAGGGGTTGTGAAGAACAGGAGGAAGTACCTCATGGTTGTGGTTTCTGGGGGAATGAATCAGCAGAGAAATCAGATTGTGGATGCTGTTGTGATTGCTAGAATTCTTGGGGCTGCTTTGGTTGTCCCCATATTACAAGTCAACGTCATTTGGGGCGATGAAAGTGAGTTCGCTGATATATTTGATTTGGAGCACTTCAAGAGTGTTCTTGCCAATGATGTTCGAGTGGTTTCTGCATTGCCATCAACGCACCTAATGTCTAGGCCAGTGGAAGGAAGCCCTCCTCTTCATGTCACTCCCAGTTGGATACGTTCACGCTATCTCAGAAGACTCAATAGAGAAGGTGTTTTGCTTTTACGTGGCTTAGATTCAAGGTTGTCTAAGGATCTTCCTTCTGATCTTCAGAAGCTTCGATGCAAGGTTGCTTTTCAAGCTTTAAGGTTTGCAAGGCCAGTTCAGGAACTCGGTAACAAGATTGCAGAGAGGATGAGAAGCAAGGGACCCTACCTTGCTCTTCATCTACGAATGGAGAAGGATGTATGGGTGAGGACTGGGTGCTCTCCCGGTCTGAGCCCCAAGTATGATGAGATTATAAACAATGAGAGGTTAAGCCGGCCAGAGCTCTTGACTGCAAAATCAAACATGACTTACCATGAAAGGAAGCTTGCTGGCCTCTGCCCTTTAAATGCCATAGAGGTTACCAGGCTGCTTAAGGCCCTAGGAGCTCCCAAAACTGCAAGAATTTATTGGGCTGGAGGGCAACCATTGGGTGGAAAAGAAACCTTGCTTCCATTAATCCAAGAGTTTCCACATTTCTACAACAAGGAAGATCTTGCCTTGCGAGGAGAGCTAGATCCATTTTCCAAAAAAGCTTCTCTTATGGCTGCCATAGATTACATTGTTTCTGAGAAGAGCGATGTTTTCATGCCATCTCATGGAGGAAATATGGGCCATGCACTTCAGGGTCACCGGGCCTATGCTGGGCATAAGAAATATATCACCCCAAACAAAAGACAGATGCTTCCCTATTTTCTAAACTCTTCCCTCCCTGAAGCAGAGTTTAACAGGATCATAAAGGAACTGCATCATGAGTCATTAGGGAACCCGGAGCTTAGGACAAGCAAGTCCGGCAGGGATGTCACCAAGTATCCAGTTCCCGACTGCATGTGCAAAGACTCGCGTGCTCGAACGTAA 1728 0.4537 MAKWKNNARKLSYISVPSQIINSISSSSLQSLLDSPKKSSRNHSRFFSFFTNYRSPRLWFFTLFLFGFLGMLKFGFNIDVPFSPYPCVTSQPQLPIANGHSKSELGVALQKGKPVENDQKNGVFNGTNSHPLIANVQLKALDKEETDEEVEKSEFWKQPDGLGYKPCLVFTRDYRRQTEGVVKNRRKYLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFADIFDLEHFKSVLANDVRVVSALPSTHLMSRPVEGSPPLHVTPSWIRSRYLRRLNREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFQALRFARPVQELGNKIAERMRSKGPYLALHLRMEKDVWVRTGCSPGLSPKYDEIINNERLSRPELLTAKSNMTYHERKLAGLCPLNAIEVTRLLKALGAPKTARIYWAGGQPLGGKETLLPLIQEFPHFYNKEDLALRGELDPFSKKASLMAAIDYIVSEKSDVFMPSHGGNMGHALQGHRAYAGHKKYITPNKRQMLPYFLNSSLPEAEFNRIIKELHHESLGNPELRTSKSGRDVTKYPVPDCMCKDSRART 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2048 575 CDD O-FucT_plant 188 509 IPR024709 -
Glsi04g2048 575 PANTHER OS02G0726500 PROTEIN-RELATED 141 569 - -
Glsi04g2048 575 Pfam GDP-fucose protein O-fucosyltransferase 188 504 IPR019378 -
Glsi04g2048 575 PIRSF UCP009360 20 572 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2048 Glsi-ChrGlsi04 70781222 70783941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2048 10 571 Miscellaneous Gene Families AT3G07900 63.419 0.0 712
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g2048 04 70781222 70783941 Glsi04g2048 04 70781222 70783941 ECH