Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2039 ATGCAACCTAGGATTTCAATCACGAAACGAACACGTGGTACTCCATCAACAATGCATCCAATTCATCCTCAAGCTCATCCTAGCCATGACGATGATGATTACAATCTGAAGGACACCAACCCACAACTTGGGGAGCGGTGGCCGGGTGGTGGAGCTTATGGTGGAAGAGGGTGGATAAGTGGTGGTGGTGAAAGGCACACAAGCACATATGACCTCGTTGAGCAGATGCTCTATCTCTATGTTCGCGTCGTGAAAGCCAAAAATCTTCCTCCAAGTGGCGTCACAGCAAGCTGTGATCCTTATGTGGAAGTGAAGTTGGGGAACTACAAAGGAAGAACAAGGCATTTTGAGAAGAAAATGAATCCAGAGTGGAACCAAGTCTTTGCTTTCTCCAAAGACAGCATTCAATCCTCGATTCTAGAGGTCTTTTTGAAAGATAAAGAAATGGTGGTGGGTAGAGATGATTATCTTGGAAGGGTGATTTTTGACCTCAATGAGGTTCCAACCAGGGTTCCACCAGACAGTCCCTTGGCTCCTCAATGGTATAGACTTGAAGATCCACGAGGCCAAGGGAAGGTAAGGGGAGAAATCATGCTAGCAGTCTGGATGGGAACTCAAGCTGATGAAGCTTTCCCAGAAGCTTGGCACTCCGATGCTGCCACTGTATACGGAGAAGGTGTTTTCAACACAAGATCAAAGGTTTATGTCTCGCCAAAACTTTGGTATCTCAGAGTCAATGTTATTGAAGCTCAAGATGTGATCCCCAGTGACAGAAATCGCCTGCCAGAGGTTTTTGTGAAAGCTCAGGTTGGAAGCCAAGTACTAAGGACGAAGATATGCCCAACAAGGACAACCACACCACTTTGGAACGAGGATTTGGTTTTTGTGGCAGCTGAGCCATTTGAGGAGCACTTGATGATCACTGTGGAGGATCGTGTGCACCCTTCGAAAGACGAGGTGCTAGGCAAGATAAGTTTGCCATTGACCCTCTTTGAGAAGAGGCTAGACCATAGGCCAGTTCATTCTCGCTGGTTCAATCTTGAGAAGTTTGGGTTTGGAGCACTGGAAGGTGACAGGAGGAACGAGCTCAAGTTTTCAAGCAGGATTCACCTAAGAGTTTGTCTTGAAGGTGGATACCATGTCCTAGATGAATCCACAATGTACATTAGTGATCAGAAACCAACAGCAAGACAGCTCTGGAAGCAGCCTATTGGGATACTTGAAGTGGGCATTTTAGCGGCACAAGGGCTTCTACCAATGAAGATGAAGGATGGCCATGGCAGCACAGATGCATATTGTGTTGCCAAATATGGCCAGAAATGGGTCCGAACCAGAACAATCCTTAACACTTATAGTCCCAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCACTGTGATAACGTTGGGGGTTTTCGACAATTGCCATCTGGGTGGAGGTGAGAAAGCTAACAATGGTGGCAATGCAGGTGCAGCCCGTGATTCACGAATTGGGAAGGTCAGGATTCGGCTTTCAACACTGGAGGCTCATAGAATCTACACTCATTCTTACCCTCTTCTTGTTCTACATCCACATGGAGTCAAGAAGATGGGTGAACTTCAGCTAGCTGTAAGGTTCACTACCCTCTCACTGGCCAACATGGTTTACACCTATGGCCAGCCCTTATTGCCCAAGATGCATTACTTACATCCTTTCACAGTGAACCAAGTAGAAAACTTAAGGTACCAAGCTATGAACATTGTAGCCGTGAGGCTTGGCCGAGCTGAACCACCTCTGAGGAAGGAGGTGGTGGAGTACATGCTGGATGTGGATTCCCATATGTGGAGCTTGAGAAGAAGCAAAGCCAATTTCTTCCGCATAATGTCCCTTTTCTCTGGCATGATTGCAATGGGAAGATGGTTCAGCGACGTTTGCCAATGGAAGAACCCCATCACAACCGTTCTAGTTCACATTCTTTTTCTAATACTCATTTGGTACCCAGAACTGATCCTTCCAACTTTGTTTCTTTACATGTTCTTGATCGGTCTTTGGAACTATAGGTTCCGCCAAAGACACCCTCCCCACATGGATACTAAGCTCTCTTGGGCAGAAGCTGTTCACCCAGATGAACTCGATGAAGAGTTTGACACATTCCCAACTTCAAGATCTCATGATGTAGTGAGAATGAGGTATGACAGGCTTAGAAGTGTTGCAGGTAGAATTCAGACAGTGGTTGGAGACATTGCTACACAAGGGGAGAGGTTTCAGTCCTTGCTCAGCTGGAGAGACCCCAGAGCAACCAGCCTCTTTGTAGCGTTTAGCTTTTGTGCAGCAGTTGTGCTCTATGCCACCCCATTCAGGGGAGTGGCACTAGTTACAGGTTTGCATTCCTTGCGCCACCCGAAATTTCGCAGCAAGCTTCCTTCTGTACCCAGCAACTTCTTCAAAAGACTGCCAGCTCGAACAGATAGTTTACTGTAG 2469 0.467 MQPRISITKRTRGTPSTMHPIHPQAHPSHDDDDYNLKDTNPQLGERWPGGGAYGGRGWISGGGERHTSTYDLVEQMLYLYVRVVKAKNLPPSGVTASCDPYVEVKLGNYKGRTRHFEKKMNPEWNQVFAFSKDSIQSSILEVFLKDKEMVVGRDDYLGRVIFDLNEVPTRVPPDSPLAPQWYRLEDPRGQGKVRGEIMLAVWMGTQADEAFPEAWHSDAATVYGEGVFNTRSKVYVSPKLWYLRVNVIEAQDVIPSDRNRLPEVFVKAQVGSQVLRTKICPTRTTTPLWNEDLVFVAAEPFEEHLMITVEDRVHPSKDEVLGKISLPLTLFEKRLDHRPVHSRWFNLEKFGFGALEGDRRNELKFSSRIHLRVCLEGGYHVLDESTMYISDQKPTARQLWKQPIGILEVGILAAQGLLPMKMKDGHGSTDAYCVAKYGQKWVRTRTILNTYSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGGEKANNGGNAGAARDSRIGKVRIRLSTLEAHRIYTHSYPLLVLHPHGVKKMGELQLAVRFTTLSLANMVYTYGQPLLPKMHYLHPFTVNQVENLRYQAMNIVAVRLGRAEPPLRKEVVEYMLDVDSHMWSLRRSKANFFRIMSLFSGMIAMGRWFSDVCQWKNPITTVLVHILFLILIWYPELILPTLFLYMFLIGLWNYRFRQRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSRSHDVVRMRYDRLRSVAGRIQTVVGDIATQGERFQSLLSWRDPRATSLFVAFSFCAAVVLYATPFRGVALVTGLHSLRHPKFRSKLPSVPSNFFKRLPARTDSLL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2039 822 CDD C2B_MCTP_PRT_plant 78 205 IPR047257 -
Glsi04g2039 822 CDD C2D_MCTP_PRT_plant 406 539 IPR047255 -
Glsi04g2039 822 MobiDBLite consensus disorder prediction 1 49 - -
Glsi04g2039 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 405 544 IPR035892 -
Glsi04g2039 822 CDD C2C_MCTP_PRT_plant 242 394 IPR047258 -
Glsi04g2039 822 Gene3D C2 domain 71 204 IPR035892 -
Glsi04g2039 822 MobiDBLite consensus disorder prediction 24 39 - -
Glsi04g2039 822 SMART C2_3c 242 342 IPR000008 -
Glsi04g2039 822 SMART C2_3c 78 176 IPR000008 -
Glsi04g2039 822 SMART C2_3c 406 519 IPR000008 -
Glsi04g2039 822 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 24 822 IPR047259 -
Glsi04g2039 822 FunFam C2 domain-containing protein 73 220 - -
Glsi04g2039 822 ProSiteProfiles C2 domain profile. 383 520 IPR000008 -
Glsi04g2039 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 241 396 IPR035892 -
Glsi04g2039 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 78 219 IPR035892 -
Glsi04g2039 822 Gene3D C2 domain 385 546 IPR035892 -
Glsi04g2039 822 Gene3D C2 domain 228 374 IPR035892 -
Glsi04g2039 822 Pfam C2 domain 78 182 IPR000008 -
Glsi04g2039 822 Pfam C2 domain 405 522 IPR000008 -
Glsi04g2039 822 Pfam C2 domain 241 347 IPR000008 -
Glsi04g2039 822 MobiDBLite consensus disorder prediction 1 18 - -
Glsi04g2039 822 FunFam C2 domain-containing protein 388 546 - -
Glsi04g2039 822 ProSiteProfiles C2 domain profile. 60 182 IPR000008 -
Glsi04g2039 822 ProSiteProfiles C2 domain profile. 222 345 IPR000008 -
Glsi04g2039 822 FunFam C2 domain-containing protein 228 375 - -
Glsi04g2039 822 Pfam Plant phosphoribosyltransferase C-terminal 667 822 IPR013583 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2039 Glsi-ChrGlsi04 70683194 70685662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2039 28 822 Lipid Metabolism Gene Families AT5G06850 76.226 0.0 1307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g2039 04 70683194 70685662 Glsi04g2039 04 70683194 70685662 ECH