Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2034 ATGATTGACATCTTCCTCTTCCTCGTCTTGCTTCTCTCGCCCCTTCTTCTTTCCATTTTCTTCAGACCCTTTATGCGAACCACCACTCTCCGCCTTCCTCCCAGCCCACCAGCCATCCCTCTCATCGGTCACCTCCACCTCCTCACTCCAACCTTGTACAAATCTTTCCATACCCTCTCCTCCAAATATGGTCCTCTTCTCTTCCTTCGCTTCGGCTCTTCTCGCTGCCTCCTCGTCTCCTCAGCCCCCGCCGCCTCCGAAATCTTCAAGACCCACGACCTTACCTTCTCTTCCCGACCCATATTCGCCTTTGCCGACAAGTTACCTTATGGGACATCTGGGTTCGTCACTGCCCCATATGGGAATTACTGGAGGTTCATGAAGAAGCTCTGTATGACCGAATTGCTTGGGCCGAGACAGCTCGAACGGTCGAGAACCATTAGAAGCGAAGAGATTCAGAGGTTCTTGTGTAGAGTGATTGAGAATGCTCGTAGGAGAGAGGCTGTAGATGTGGGAGCTGAGCTCGTGAAGCTCACGAACAATGCGACTTGCAGGATGGTGATGAGCACCAGGTGTTCGGAGACAGATCACGAGGCTGAAAGGATCAGAGGGCTTGTTAAGAAGTCTTTTGAGTTGGCTGCCAAGTTGTGTTTTGGGGATGTGTTGGGGTCACTCAAGGGATTGGCCTACTGGGTTTATGGGAAGCAGGCAGTGGAGCTGACCTGGAGGTATGATGAGTTGTTGGAGAAGGTGCTGAAGGAGCATGAAGAGAAAAGAGTTGGGCATGGACAAGAAGCTCAGAAAGATTTGATGGATATTCTGTTGGATGTTCATCAAGATGATAATGCAGAGTTTAAGATCACAAGGACCCATATCAAAGCCTTCTTTCTGGTCAAAGACTTTGATGTGCCTGCAAAAACTGCAGTGGCAATCAATTTATATGCTATAATGAGGGACCCAGATTCTTGGGATGATCCTAATGAGTTCCGCCCTGAAAGGTTCTTAGTCTCTAATTTGAAACTACAAGATGATGATCCGAGTGATGGTGATCAGAATGATGCTAAGAGAATGAAATTCAATTTTGTTCCATTTGGGGCTGGAAGGAGAGGGTGTCCAGGGACAACACTAGCATTCAACTTGATAAATACTGTGATTGCAGCTATGGTTCAGTGCTTTGATTGGAAAATTGGTGAAGATGGGAAAGGAGATGAGGTTGATATGGAATCTGGACCAGGCATGTCCTTGAGCATGAAAATTCCGCACGGTTTAGCATTTGGAACAAATACTGGATCTGAAGCAGCGGTTTTCACTTTGCAAAATGGATGTAGGAACCCAATATGGCCTGGGATTCTAAAAACAGCAGGGAAGCCTCAGCTACTGGGTGGTGGAGATCAGCTAAGACCTGGCCAAATCATAAATATGACAACTCCAAAAGGGTGGTATGGCCAGTTCTGGAGGAGGCACCGGTGCTCTTTCAATAACTTCGGTAAGGGAACATGCATCACCGGAGAATGCAAAGGCAAGCTCAAATGTGGCGGAGCAAGAGGTGCACCACCAGTTACATTGGCATAG 1572 0.4777 MIDIFLFLVLLLSPLLLSIFFRPFMRTTTLRLPPSPPAIPLIGHLHLLTPTLYKSFHTLSSKYGPLLFLRFGSSRCLLVSSAPAASEIFKTHDLTFSSRPIFAFADKLPYGTSGFVTAPYGNYWRFMKKLCMTELLGPRQLERSRTIRSEEIQRFLCRVIENARRREAVDVGAELVKLTNNATCRMVMSTRCSETDHEAERIRGLVKKSFELAAKLCFGDVLGSLKGLAYWVYGKQAVELTWRYDELLEKVLKEHEEKRVGHGQEAQKDLMDILLDVHQDDNAEFKITRTHIKAFFLVKDFDVPAKTAVAINLYAIMRDPDSWDDPNEFRPERFLVSNLKLQDDDPSDGDQNDAKRMKFNFVPFGAGRRGCPGTTLAFNLINTVIAAMVQCFDWKIGEDGKGDEVDMESGPGMSLSMKIPHGLAFGTNTGSEAAVFTLQNGCRNPIWPGILKTAGKPQLLGGGDQLRPGQIINMTTPKGWYGQFWRRHRCSFNNFGKGTCITGECKGKLKCGGARGAPPVTLA 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2034 523 SUPERFAMILY Osmotin, thaumatin-like protein 434 523 IPR037176 -
Glsi04g2034 523 Gene3D Cytochrome P450 25 296 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g2034 523 Gene3D Thaumatin 434 523 IPR037176 -
Glsi04g2034 523 ProSiteProfiles Thaumatin family profile. 433 523 IPR001938 -
Glsi04g2034 523 SMART tha2 436 523 IPR001938 -
Glsi04g2034 523 Pfam Thaumatin family 440 523 IPR001938 -
Glsi04g2034 523 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 297 - -
Glsi04g2034 523 Pfam Cytochrome P450 33 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g2034 523 Pfam Cytochrome P450 298 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g2034 523 PRINTS E-class P450 group I signature 371 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g2034 523 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g2034 523 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g2034 523 PRINTS E-class P450 group I signature 361 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g2034 523 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g2034 523 Gene3D Cytochrome P450 297 424 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi04g2034 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 364 373 IPR017972 GO:0005506|GO:0016705
Glsi04g2034 523 SUPERFAMILY Cytochrome P450 28 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2034 Glsi-ChrGlsi04 70620250 70625525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2034 298 420 Cytochrome P450 AT3G20940 44.355 2.48e-28 116