Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2031 ATGGACAAAGGAGTGCCTCCTAGCCTTTTTGTTAATGATGGTTCTTTCATGGAGAGGTTCATGCAACTTCAACAAGAGCAGGAGAAGGACAAGAATGCCAAACTAGAGGAGTCTAAACCGATCAAAATTGTTTCAGGGTCTTTGACTCCTAATCCCTCCATTAAAAAAACTTCTGTGGACGTCAAGGCTAACAGTGGCTCCAGTGGCAAACTTGCTTTTAGTTTAAAACAAAAGTCAAAGCTAGTTCCACCACCTGTTAAATTAAGTGCTGAAGAGGATGAAGAAGATACACATGCTGGTGATGTTTCAAGTGATGTGCCATCAAAACGGCTGAAGTTGGATGAGGAGGGTCTATCTGAGCAATCATCTAGACAACTTGATGTTGCACCTCCCTCCCCAAGTGACCATACAGTGAAGAAAGTTGCTGACAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACACGCCAAAAAAATCCTGGTGATACACCTTTCAAATTTTTGTTTGATGAGAAATGCACTGACTACAAATATTATCAACATCGACTTGCTCAAGAGGAAAAGGCTCTTGCACAGTCAAGGGAATCACAGATATCTCAAAATGGTTCTACAAATGCTTTATCTTCCAGATCAACAATTGGTTCTCAGAGAACATCTCAACAGCTTTCAACTTACCAAATTCCTGCATCTGCTTTATATGAAAGTGCTGATGAGCCTGGTGTATCATTAAGTGCTGCTGATTCATTAGCCCGAATGGAGTTCTACATGAAGAAAGCTGCACAGGAAGAGAAGATGAGACAACCTAAGCAGTCAAAGGATGAGATGCCTCCTCCTGCTTCTCTTCAAGGGGGAACAGCTAGTACAAAAAAGGGTCATCACATGGGTGATTACATCCCCCCAGAAGAACTTGAGAAGTTTTTGGCTAACTGTAATGATGCAGCTGCACGGAAAGCTGCCAAGGAGGCTGCAGAGAAGGCTAAAATTCAGGCTGATAATGTGGGCCACAAGCTCTTGTCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTGGGCAGCTCCAGGACAGGTATTTCAGATCCAATCATGGCAGGCAATGTTAAAATGAATAACTTGGGAGTTGGTGCTCAGAATCCTGGGGATGTGAATCCTGATGATGATATATATGAGCAGTACAAAAAGCGGATGATGCTCGGTTATCGTTACAGACCCAACCCTCTGAACAATCCTCGCAAGGCTTATTATTGA 1257 0.4272 MDKGVPPSLFVNDGSFMERFMQLQQEQEKDKNAKLEESKPIKIVSGSLTPNPSIKKTSVDVKANSGSSGKLAFSLKQKSKLVPPPVKLSAEEDEEDTHAGDVSSDVPSKRLKLDEEGLSEQSSRQLDVAPPSPSDHTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDEKCTDYKYYQHRLAQEEKALAQSRESQISQNGSTNALSSRSTIGSQRTSQQLSTYQIPASALYESADEPGVSLSAADSLARMEFYMKKAAQEEKMRQPKQSKDEMPPPASLQGGTASTKKGHHMGDYIPPEELEKFLANCNDAAARKAAKEAAEKAKIQADNVGHKLLSKMGWKEGEGLGSSRTGISDPIMAGNVKMNNLGVGAQNPGDVNPDDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2031 418 MobiDBLite consensus disorder prediction 23 38 - -
Glsi04g2031 418 Pfam Surp module 140 190 IPR000061 GO:0003723|GO:0006396
Glsi04g2031 418 SMART G-patch_5 333 380 IPR000467 GO:0003676
Glsi04g2031 418 ProSiteProfiles G-patch domain profile. 335 382 IPR000467 GO:0003676
Glsi04g2031 418 MobiDBLite consensus disorder prediction 87 121 - -
Glsi04g2031 418 SMART surpneu2 139 193 IPR000061 GO:0003723|GO:0006396
Glsi04g2031 418 MobiDBLite consensus disorder prediction 44 74 - -
Glsi04g2031 418 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 2 418 IPR040169 -
Glsi04g2031 418 SUPERFAMILY Surp module (SWAP domain) 125 192 IPR035967 GO:0003723|GO:0006396
Glsi04g2031 418 Gene3D Surp module 113 198 IPR035967 GO:0003723|GO:0006396
Glsi04g2031 418 Pfam G-patch domain 336 379 IPR000467 GO:0003676
Glsi04g2031 418 MobiDBLite consensus disorder prediction 265 302 - -
Glsi04g2031 418 MobiDBLite consensus disorder prediction 23 137 - -
Glsi04g2031 418 MobiDBLite consensus disorder prediction 192 226 - -
Glsi04g2031 418 ProSiteProfiles SURP motif repeat profile. 141 184 IPR000061 GO:0003723|GO:0006396
Glsi04g2031 418 MobiDBLite consensus disorder prediction 195 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2031 Glsi-ChrGlsi04 70588119 70594496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2031 324 384 C2H2 Transcription Factor Family AT5G26610 44.262 5.36e-09 55.5