Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2026 ATGTATTCCATACGTTACACATCTAGTGAGGAAAACTACCTGTACCTGAGTGGATGCAGAATGGGGTTTTCTAAGCCTATTTGGAAGTTGAATCTGCTGAGGCCTTGGACTCGCGAAGCTGCAACAATGGTGGAGAAGACGGCGAAAGGGAGAAAGGAGGAGGTTGTCACCAGGGAGTACACGATCAACCTTCACAAGCGCTTGCATGGATGCACATTCAAGAAGAAAGCTCCGAAAGCAATTAAGGAAATTAGGAAGTTTGCCCAAAAGGCAATGGGAACAACTGATGTCAGAGTAGATGTCAAGCTTAACAAGCATGTCTGGAGTGGTGGAATTCGGAGCGTCCCAAGAAGAGTTCGTGTTCGCGTAGCACGAAAAAGAAATGATGAAGAAGATGCTAAGGAAGAGTTTTATTCATTAGTCACTGTTGTAGACATCCCAAAAGAAGAATTGAAAGGTTTGGGCACCAAGGTGATTGATGAAGAGGATTAA 492 0.4431 MYSIRYTSSEENYLYLSGCRMGFSKPIWKLNLLRPWTREAATMVEKTAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHVWSGGIRSVPRRVRVRVARKRNDEEDAKEEFYSLVTVVDIPKEELKGLGTKVIDEED 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2026 163 FunFam 60S ribosomal protein L31 49 162 - -
Glsi04g2026 163 CDD Ribosomal_L31e 52 112 IPR000054 GO:0003735|GO:0005840|GO:0006412
Glsi04g2026 163 Gene3D - 51 163 IPR023621 -
Glsi04g2026 163 SUPERFAMILY Ribosomal protein L31e 54 135 IPR023621 -
Glsi04g2026 163 SMART Ribosomal_L31e_2 53 136 IPR000054 GO:0003735|GO:0005840|GO:0006412
Glsi04g2026 163 Pfam Ribosomal protein L31e 54 135 IPR000054 GO:0003735|GO:0005840|GO:0006412
Glsi04g2026 163 PANTHER 60S RIBOSOMAL PROTEIN L31 44 162 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2026 Glsi-ChrGlsi04 70552800 70556166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2026 49 163 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 82.609 1.37e-66 197