Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2024 ATGGTTCAGAAAACGGAGAAGGAAGAGACCGAGTTCAAGGTTCCCGAAACCATCACCCCCTGCGTCAACAACTGCGGTGTCACCGGAAACCCAGCCACCAACAATATGTGCCAGAAGTGCTTCAACGCTACCGCCTCCGCCGGAATTTCAGCCCCTTGTAAATTTTCCGACGACAAAGCTAGATCCGCCACGTCTCGCTCTCCCAAGAGATCTTATCCTCCCGACGAGGAGCCGACGGAGAATCCTACGCCGGATCGGAGGAAGCCGGACGAAACGACGCAGTCCGAAGCAAAGCGTGTTGTGAATCGATGCTCCGGATGCCGACGGAAGGTCGGGTTGACCGGATTCCGGTGCCGGTGTGGAGAGCTGTTCTGCGCCGAACACCGGTACTCCGATCGCCACGACTGCAACTACGACTACAAAGCCGCCGGACGCGAGGCGATAGCGAGGGAAAATCCGGTGGTAAAAGCCGCTAAGATCGTGAAAGTTTGA 492 0.5691 MVQKTEKEETEFKVPETITPCVNNCGVTGNPATNNMCQKCFNATASAGISAPCKFSDDKARSATSRSPKRSYPPDEEPTENPTPDRRKPDETTQSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCNYDYKAAGREAIARENPVVKAAKIVKV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2024 163 FunFam Zinc finger AN1-type containing 6 78 159 - -
Glsi04g2024 163 SMART AN1_Zf_4 104 141 IPR000058 GO:0008270
Glsi04g2024 163 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Glsi04g2024 163 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 1 74 - -
Glsi04g2024 163 Gene3D - 3 72 - -
Glsi04g2024 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 45 - -
Glsi04g2024 163 PANTHER AN1-TYPE ZINC FINGER PROTEIN 19 162 - -
Glsi04g2024 163 MobiDBLite consensus disorder prediction 50 98 - -
Glsi04g2024 163 Pfam A20-like zinc finger 20 42 IPR002653 GO:0003677|GO:0008270
Glsi04g2024 163 SUPERFAMILY AN1-like Zinc finger 86 157 IPR035896 -
Glsi04g2024 163 ProSiteProfiles Zinc finger AN1-type profile. 98 144 IPR000058 GO:0008270
Glsi04g2024 163 Gene3D - 77 149 IPR035896 -
Glsi04g2024 163 Pfam AN1-like Zinc finger 104 141 IPR000058 GO:0008270
Glsi04g2024 163 MobiDBLite consensus disorder prediction 59 97 - -
Glsi04g2024 163 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2024 Glsi-ChrGlsi04 70525086 70525577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2024 8 163 C2H2 Transcription Factor Family AT3G52800 38.095 7.77e-32 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g0573 14 6665587 6666105 Glsi04g2024 04 70525086 70525577 ECH
Glsi04g2024 04 70525086 70525577 Glsi04g2024 04 70525086 70525577 ECH