Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2008 ATGAGGCCACTTTTGCTCCATTCGAAGCTCGCCTCCCTCCGCACAATTCTCCTCGGTCTTCTCTCTTGCCTTGCGCTTTTTCAAACCTCTCTCTGCGAGAGGCGAACCTACGCCTCCAAGGATCTCGCGCACCCACCAATCTCCTCCATTTGCTTTCAAAGGGAAGTCATCATGGTTGATCAGGTTCAACACCCTACAATCGTTGAGAAGGTTGCTGGCCAGCTCCATCTGCGCTATGGTCCCTCATCTAACTTGCGGAGTTATGATGGAAGCTTCCATAGGCCTGCTATCTACCAGAGATCCTCATTTGGGAATTACTCAAATGCTGCATTGCAGTATCCTGTGATTCCTGCATGCAGAGCTACAACCGATTTGTCTTCCGTTGCAGCAACAGCCTCTCCTATCTTTGTTGCAGCTCCAGCAGAGAAGGGACACTTTCTTATTGACTTTCTTATGGGTGGAGTTTCAGCTGCTGTATCTAAAACTGCTGCTGCTCCCATTGAACGTGTTAAACTTTTGATACAGAACCAGGATGAGATGATCAAATCTGGCAGGCTCTCTGAGCCCTATAAGGGTATTGGTGATTGTTTCAAGAGAACAATGAAGGATGAGGGTGCTATTTCTTTATGGAGAGGTAACACTGCTAATGTCATCCGTTATTTCCCTACTCAGGCTTTGAACTTTGCTTTTAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAAGACAGAGATGGTTACTGGAAATGGTTTGCTGGCAATTTGGCCTCAGGAGGTGCTGCTGGTGCTTCATCTCTTTTCTTTGTTTACTCTCTTGACTATGCACGTACCCGCCTGGCTAATGATGCAAAGGCTGCAAAGAAGGGTGGAGGAAGGCAATTCAATGGGCTTGTTGATGTCTACAGGAAGACATTGGCATCTGATGGTATAGCTGGTCTTTACCGTGGTTTCAACATCTCATGTGTTGGAATCATTGTGTATCGTGGTCTCTACTTTGGAATGTATGATTCCCTCAAGCCAGTTCTCCTAACTGGAAAATTACAGGATAGCTTTTTCGCAAGCTTTGCCCTTGGATGGCTCATCACCAACGGTGCTGGGCTGGCATCATACCCAATTGACACTGTTAGAAGAAGAATGATGATGACCTCAGGGGAAGCTGTGAAGTACAAGAGCTCCTTGGATGCATTTTCTCAAATCCTCAAGAACGAGGGTGCCAAGTCATTGTTCAAGGGAGCAGGTGCAAACATCCTGCGTGCTGTTGCTGGTGCTGGTGTGCTTGCCGGTTATGACAAGTTGCAGGTGTTGGTGTTTGGGAAGAAGTACGGTTCCGGTGGTGCTTAA 1341 0.4691 MRPLLLHSKLASLRTILLGLLSCLALFQTSLCERRTYASKDLAHPPISSICFQREVIMVDQVQHPTIVEKVAGQLHLRYGPSSNLRSYDGSFHRPAIYQRSSFGNYSNAALQYPVIPACRATTDLSSVAATASPIFVAAPAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGAISLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGGGRQFNGLVDVYRKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVFGKKYGSGGA 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2008 446 SUPERFAMILY Mitochondrial carrier 145 431 IPR023395 -
Glsi04g2008 446 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 137 445 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi04g2008 446 Gene3D Mitochondrial carrier domain 147 442 IPR023395 -
Glsi04g2008 446 PRINTS Adenine nucleotide translocator signature 190 211 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi04g2008 446 PRINTS Adenine nucleotide translocator signature 249 262 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi04g2008 446 PRINTS Adenine nucleotide translocator signature 223 235 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi04g2008 446 PRINTS Adenine nucleotide translocator signature 146 158 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi04g2008 446 PRINTS Adenine nucleotide translocator signature 354 370 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi04g2008 446 Pfam Mitochondrial carrier protein 145 241 IPR018108 -
Glsi04g2008 446 Pfam Mitochondrial carrier protein 248 344 IPR018108 -
Glsi04g2008 446 Pfam Mitochondrial carrier protein 350 437 IPR018108 -
Glsi04g2008 446 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 341 IPR018108 -
Glsi04g2008 446 ProSiteProfiles Solute carrier (Solcar) repeat profile. 349 435 IPR018108 -
Glsi04g2008 446 ProSiteProfiles Solute carrier (Solcar) repeat profile. 144 237 IPR018108 -
Glsi04g2008 446 FunFam ADP,ATP carrier protein, mitochondrial 147 442 - -
Glsi04g2008 446 PRINTS Mitochondrial carrier protein signature 162 176 IPR002067 GO:0055085
Glsi04g2008 446 PRINTS Mitochondrial carrier protein signature 264 282 IPR002067 GO:0055085
Glsi04g2008 446 PRINTS Mitochondrial carrier protein signature 149 162 IPR002067 GO:0055085
Glsi04g2008 446 PRINTS Mitochondrial carrier protein signature 314 332 IPR002067 GO:0055085
Glsi04g2008 446 PRINTS Mitochondrial carrier protein signature 358 380 IPR002067 GO:0055085
Glsi04g2008 446 PRINTS Mitochondrial carrier protein signature 212 232 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2008 Glsi-ChrGlsi04 70253307 70259834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g2008 58 446 Antiporters AT5G13490 81.425 0.0 619