Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g2000 ATGGCTGAGAATGGAAGTTTGCAAGCATCTAAGAGAAAGTGGAAGAATATTCCCCTCAATGTTTTCTTCACAGATGCAAGACTTGTGTTCAAGCTCGATTCACTTGGTAAGGAAATACTGGGAATTGCATTTCCTGCTGCACTGGCTGTTGCTGCTGATCCTGTTGCATCTTTGATAGACACAGCATTCATAGGCCACTTAGGACCGGTGGAACTTGCTGCTGCAGGAGTGTCCATTGCCTTGTTCAACCAAGCTTCAAGGATTTTCATATTCCCTCTGGTCAGCATTACAACTTCCTTTGTAGCTGAGGAAGACACTATTAATAGAGCCAGCACTAAAGTAGCCGAAGAGCACTTGGCTGATCAGAACAACAAGGCAAAAGAAGTTCAGCTTGAGGCTAATATGCTTCAAGACATAGAAAAAGGTTCATTTAAAGAGAATACTGCTGAGAGTTTGGGGAAATCTTCATCTGGGAACTGTGAAATGAAAGAGTCTTTGCCTGTGCATGAGAATGTGGAGAGAGACGCTACTCTCAAAATTGACAAGAGTCATGAAGATGATACCAACACAAATATATGCAAGTCTTCCTCTGCTACTGTTAGTAAGGAAAAAATTGGAAGGAAGAGGCGACACATTGCTTCTGCGTCGACAGCACTACTTTTTGGCATAATTCTTGGCCTTCTTCAAGCTGCACTCCTTATATTTGCAGCCAAACCTCTATTAGAAGTGATGGGTCTAAAACCAGATTCTCCTATGCTACTCCCAGCTCAAAGGTACTTGAGATTGAGATCACTAGGTGCTCCTGCAGTTCTTCTCTGTTTGGCCATGCAAGGAATCTTTCGAGGGTTCAAGGACACAAAAACTCCTCTTTATGTCATTGTTTTGGGATATGCAGTAAATGTCATTTTGGATCCAATACTTATATTTTACTGCAAATTGGGCATCAGAGGTGCAGCAATTGCACATGTTCTCTCCCAGTACCTGATGGCTCTGACCCTCTTCTTGATATTAATGAAAAAAGTGGATCTCTTACCTCCAAGTGTCAAGCATTTGCAGATTTTTCGCTTTCTGAAAAATGGAGGCTTGTTGTTGGCAAGAGTAGTAGCAGTGACTTTCTGTGTGACCTTGGCTGCATCATTGGCAGCAAGGCTGGGGTCAGTTCCTATGGCTGCATTTCAGACCTGCCTTCAAGTTTGGCTGACATCCTCCCTTCTTTCTGATGGTTTAGCTGTTGCCATACAGGCAATTCTGGCCTCCTCCTTTGCTGAGAAAGACTATGCTAAGTCAACAGCTGCTGCCACAAGAGTCCTACAGATGAGTTTTGTTCTGGGAGTAGGGCTCTCTCTTCTTGTTGGAGTTGGATTGTACCTCGGAGCTGGAGTCTTTTCCCAAAATCTTCAAGTTCTACACCTTATCAAAATAGGCCTCCCGTTTGTTGCTGCTACACAACCAATCAATTCATTAGCCTTTGTGTTTGATGGTGTGAACTTTGGAGCATCTGATTTTGCATATGCTGCATACTCCTTGGTCATGGTGTCCATAGCAAGTGTTGCTTCTTTGTTCCTACTCTACAGGAGCAAAGAGTTCGTTGGAATCTGGATTGCTCTAAGTATCTATATGAGTCTTCGCATGTTTGCTGGCGTTTGGAGGATGGGAACAGGAACAGGACCTTGGCGCTTTCTCAGAAAGGGCTTGTCTTAG 1701 0.4368 MAENGSLQASKRKWKNIPLNVFFTDARLVFKLDSLGKEILGIAFPAALAVAADPVASLIDTAFIGHLGPVELAAAGVSIALFNQASRIFIFPLVSITTSFVAEEDTINRASTKVAEEHLADQNNKAKEVQLEANMLQDIEKGSFKENTAESLGKSSSGNCEMKESLPVHENVERDATLKIDKSHEDDTNTNICKSSSATVSKEKIGRKRRHIASASTALLFGIILGLLQAALLIFAAKPLLEVMGLKPDSPMLLPAQRYLRLRSLGAPAVLLCLAMQGIFRGFKDTKTPLYVIVLGYAVNVILDPILIFYCKLGIRGAAIAHVLSQYLMALTLFLILMKKVDLLPPSVKHLQIFRFLKNGGLLLARVVAVTFCVTLAASLAARLGSVPMAAFQTCLQVWLTSSLLSDGLAVAIQAILASSFAEKDYAKSTAAATRVLQMSFVLGVGLSLLVGVGLYLGAGVFSQNLQVLHLIKIGLPFVAATQPINSLAFVFDGVNFGASDFAYAAYSLVMVSIASVASLFLLYRSKEFVGIWIALSIYMSLRMFAGVWRMGTGTGPWRFLRKGLS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g2000 566 MobiDBLite consensus disorder prediction 148 162 - -
Glsi04g2000 566 MobiDBLite consensus disorder prediction 148 168 - -
Glsi04g2000 566 NCBIfam MATE family efflux transporter 45 533 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Glsi04g2000 566 Coils Coil 112 139 - -
Glsi04g2000 566 CDD MATE_DinF_like 53 553 IPR044644 -
Glsi04g2000 566 Pfam MatE 213 306 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Glsi04g2000 566 Pfam MatE 367 514 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Glsi04g2000 566 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 9 563 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g2000 Glsi-ChrGlsi04 70076293 70081550 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g2000 04 70076293 70081550 Glsi04g2000 04 70076293 70081550 ECH