Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1963 ATGTCGAAAGCCGGAGCAATGGATCTTGCATCAGGTCTCGGAGGAAAGATTGACAAAGCCGAAGTTCTTTCTGCTGTTGATAAGTATGAGAAGTATCATGTTTGTTATGGAGGTGATGAGGAAGAGAGAAAAGCTAACTACACTGATATGGTTAATAAATATTATGATCTTGTTACCAGCTTTTATGAGTTTGGCTGGGGGGAATCTTTTCACTTTGCAACCAGATGGAAAAACGAATCTCTTCCAGAAAGCATCAAACGACATGAGCACTTCCTTGCTTTACAACTTGGCTTGAAGCCTGGACAGAAGGTTTTGGATGTTGGATGTGGAATTGGAGGACCACTAAGAGAAATTTCTCGATTCAGCATGACATCGATTACCGGGTTGAACAACAATGAGTACCAAATAACAAGAGGAAAGGAACTCAATCGCAAAACTGGAGTTGACAAGACCTGCAATTTTGTCAAGGCAGACTTTATGAAAATGCCATTCGAGGACAATTCTTTTGATGCAGTATATGCAATTGAAGCTACTTGCCATGCTCCAGATGCTCATGGATGCTATAAAGAGATTTATAGAGTCTTGAAGCCAGGTCAATATTTTGCTGCATATGAATGGTGCATGACCGATGCCTTTGATCCCAGTAACCCTGAACACCGAAAAATAAAGGCAGAAATTGAGCTCGGCGATGGGCTTCCTGACATTAGATTGACTACAAAGTGTCTTGAAGCTCTGAAGGAAGCAGGGTTTGAGATCATCTGGGAAAAAGATCTTGCAGTGGACTCTCCACTTCCTTGGTACTTGCCTTTGGATACAAGTCACTTCTCTCTGAGTAGTTTCCGGTTGACAGCTATTGGTCGGCTTTTCACAAGAAACATGGTCAAGGCTCTTGAGTATGTTGGACTAGCACCAAAGGGAAGTCTAAGGGTTCAAGAATTCCTGGAAAAGGCTGCAGAAGGACTAGTTGCAGGTGGAAAGAAAGAGATTTTCACACCAATGTATTTCTTTTTGGCGCGGAAGCCGGTTTCCGATAGTCACTAG 1041 0.4256 MSKAGAMDLASGLGGKIDKAEVLSAVDKYEKYHVCYGGDEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFATRWKNESLPESIKRHEHFLALQLGLKPGQKVLDVGCGIGGPLREISRFSMTSITGLNNNEYQITRGKELNRKTGVDKTCNFVKADFMKMPFEDNSFDAVYAIEATCHAPDAHGCYKEIYRVLKPGQYFAAYEWCMTDAFDPSNPEHRKIKAEIELGDGLPDIRLTTKCLEALKEAGFEIIWEKDLAVDSPLPWYLPLDTSHFSLSSFRLTAIGRLFTRNMVKALEYVGLAPKGSLRVQEFLEKAAEGLVAGGKKEIFTPMYFFLARKPVSDSH 346
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1963 346 PANTHER ZGC:194242 1 342 - -
Glsi04g1963 346 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 54 341 IPR030384 GO:0008168
Glsi04g1963 346 Pfam Methyltransferase domain 105 202 IPR013216 GO:0008168
Glsi04g1963 346 FunFam Methyltransferase 25 276 - -
Glsi04g1963 346 CDD AdoMet_MTases 103 198 - -
Glsi04g1963 346 Pfam Sterol methyltransferase C-terminal 278 341 IPR013705 GO:0006694|GO:0008168
Glsi04g1963 346 Gene3D Vaccinia Virus protein VP39 26 276 IPR029063 -
Glsi04g1963 346 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 45 342 IPR029063 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi04g1963 Glsi-ChrGlsi04 69509742 69516562 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1963 89 257 Acyl Lipid Metabolism Gene Families AT1G48600 31.361 4.27e-14 71.2