Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi04g1951 | ATGAGTGGAATAGGGAAGACAACTCTTGCCAAATTAGTTTATAACAGGGTTTCTTGGCGATTCGGTGCTTCTTGTTTCCTCACCAATGTAACCCAAGTTTCCCTCCTTTCAGATGTAAATGTTGCTCTACAAGAACAACTTCATCGTCAAACTCCGATGCAGAAAAATGTACAGATAAGGGATTTTGTCACGGAATCCTCACTACTACCCCCCATTCAAAGGTACCTCAACACTCTCATAGTTATTGATGATGATGGAAGATTCAACCAATTAGAGGGTAACACTAGATATTTTGGTCAAGGGACTAGAGTTCTCATAACATCTACTAGAGATACTGAAATTCTTCGGAGGTATGTGGATGTTATTTACGAGATTAAAGGATTGGACATGGATGAAGCTCTACAACTTTTTGGTAGACATGCTTTCAAATCTGGTTATCCTGAGACATACTTTGAATTTTATCAATAG | 468 | 0.3846 | MSGIGKTTLAKLVYNRVSWRFGASCFLTNVTQVSLLSDVNVALQEQLHRQTPMQKNVQIRDFVTESSLLPPIQRYLNTLIVIDDDGRFNQLEGNTRYFGQGTRVLITSTRDTEILRRYVDVIYEIKGLDMDEALQLFGRHAFKSGYPETYFEFYQ | 155 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi04g1951 | 155 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 1 | 147 | IPR044974 | GO:0006952 | |
| Glsi04g1951 | 155 | Pfam | NB-ARC domain | 1 | 144 | IPR002182 | GO:0043531 | |
| Glsi04g1951 | 155 | Gene3D | - | 1 | 122 | IPR027417 | - | |
| Glsi04g1951 | 155 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 152 | IPR027417 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi04g1951 | Glsi-ChrGlsi04 | 69268469 | 69268936 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi04g1951 | 1 | 141 | WRKY Transcription Factor Family | AT5G45050 | 36.552 | 3.34e-15 | 70.1 |