Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1949 ATGAGTGGAATAGGGAAGACAACTCTTGCCAAATTAGTTTACAACAGGGTTTCTTGGCTATTCGGTGCTTCTTGTTTCCTTGCCAGTGTAACCCAAGTTTCCCAGCTTTCAGGTGTTGTTGCTCTACAAGAACAACTTCGTCAATCTCTGATGCAGAAAAATGAAACGGAGTTGGTTGAAGCTGTAGCCTTGAATCCAGACGTTCTGCAAAAAGTATCATTTTGGGCTGAAGCTTTATCAAAAATGAGAAAGCTCCGACTCTTCATATTCCGCCAGTATCCTTTAACTTGCTTGCCATCAAGGTTCGAGCCACATGCACTCGTTGAATTGGTCATGTCTAATAGTAGCATCACACAATTATGGGAAGGAATAAAGACTCTCCCCAACTTGAGAAGTATGGATCTACGTAATTCCAGAGACCTAATCAAGACGCCAGATTTTAGAGGGATCCCAAACCTTGAGAGACTAGACCTTAAAGGATGTATTGGATTATTGCAAGTTGATTCATCTATTGAAATTCTTACAAATCTCAAATTCTTGAATCTGAGAAACTGCAAAAGTCTTGTTAGTGTTCCAAACAGTTTATTTGGTCTAAGTTTTCTTGAATATCTAAATCTTGCTGGCTGCTCAAAACTTGGGGAATATTTGGACTTTGACAATTGGAGAAGCTTAATAGAAATGTTTGACCTGCACAAAGACCATTCTTCATTGCCTCGGCCTAAGGGATTGCAATTTGTCTGGAGAGTTTTGGAAGCATCTGGGTTTGATTACTTTACTGACTAA 783 0.3959 MSGIGKTTLAKLVYNRVSWLFGASCFLASVTQVSQLSGVVALQEQLRQSLMQKNETELVEAVALNPDVLQKVSFWAEALSKMRKLRLFIFRQYPLTCLPSRFEPHALVELVMSNSSITQLWEGIKTLPNLRSMDLRNSRDLIKTPDFRGIPNLERLDLKGCIGLLQVDSSIEILTNLKFLNLRNCKSLVSVPNSLFGLSFLEYLNLAGCSKLGEYLDFDNWRSLIEMFDLHKDHSSLPRPKGLQFVWRVLEASGFDYFTD 260
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1949 260 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 80 218 IPR044974 GO:0006952
Glsi04g1949 260 Pfam Leucine Rich Repeat 176 196 IPR001611 GO:0005515
Glsi04g1949 260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 56 IPR027417 -
Glsi04g1949 260 SUPERFAMILY L domain-like 81 226 - -
Glsi04g1949 260 Gene3D Ribonuclease Inhibitor 83 241 IPR032675 -
Glsi04g1949 260 Gene3D - 1 82 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi04g1949 Glsi-ChrGlsi04 69239768 69242499 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1949 84 215 WRKY Transcription Factor Family AT4G12020 43.571 2.59e-21 91.3