Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1945 ATGGTGTGCATAAGGAAAGCCACAGTAGATGATCTATTGGCCATGCAGGCCTGCAATTTGTTTTGCCTTCCCGAGAATTACCAGATGAAGTATTATCTCTACCACATCCTCTCATGGCCTCAGCTTCTCTACGTTGCTGAAGATTACAACGGCCGAATTGTCGGTTACGTTTTGGCCAAGATGGAAGAAGAAACCAACGAGTGCCATGGCCATATCACTTCCCTCGCGGTGCTCCGAACCCATCGTAAACTGGGTTTGGCTACGAAGCTCATGAGCGCCGCTCAGAACGCGATGGAGCAAGTTTTTGGAGCAGAGTATGTTTCGCTTCACGTGAGGAAGAGCAATCGGGCGGCGTTCAATTTGTATACCGAGACGCTGAAGTATAAGATTCATGATGTGGAGGCGAAGTATTATGCAGATGGGGAGGATGCTTATGACATGAGGAAGCAGCTGAAGGGAAAGCAATTGCATCATCATGGTGGTGGTCATCACCATCACCATCATCATCATGAACATGGCGGTGGCTGTTGTTCTGGTGAGACTAAGGCGGAGAAGACTGAAACAAAAGGGAGTGCAAAGACAGAGTCGAAAGGGAGTGTGAAAGCGGCATGA 612 0.4869 MVCIRKATVDDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETNECHGHITSLAVLRTHRKLGLATKLMSAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLKYKIHDVEAKYYADGEDAYDMRKQLKGKQLHHHGGGHHHHHHHHEHGGGCCSGETKAEKTETKGSAKTESKGSVKAA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1945 203 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 186 IPR045047 GO:0004596|GO:0006474|GO:0031415
Glsi04g1945 203 FunFam N-alpha-acetyltransferase daf-31-like 2 176 - -
Glsi04g1945 203 MobiDBLite consensus disorder prediction 153 203 - -
Glsi04g1945 203 CDD NAT_SF 43 110 - -
Glsi04g1945 203 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 156 IPR016181 -
Glsi04g1945 203 MobiDBLite consensus disorder prediction 153 172 - -
Glsi04g1945 203 Gene3D - 2 195 - -
Glsi04g1945 203 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016747
Glsi04g1945 203 MobiDBLite consensus disorder prediction 173 194 - -
Glsi04g1945 203 Pfam Acetyltransferase (GNAT) family 39 124 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1945 Glsi-ChrGlsi04 69200940 69201551 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Glsi04g1945 Acetyltransf_1 7.8e-15 CL0257