Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1944 ATGGGCAAAGAAAGACATTGTTGGTTCCTTCTTCTTCTGCAATCCTTTCTTATGCTTTCACTTTTTGTGGGTGGAATCCATGGAAGCAATCAAGTACAAGCTCTGAAGAATCTGCAGAAGTCCAAGTTCAGAGGGCTCAATTCAGAAATCGATAAGAACCCCTTTGATGCAGAAGAGATTGCCCTCGATGCTCATCATCGTGTTTATTCTCAAGAGGGTTTGAAAGAGAAAGATAGGATAGTGAGGCTTCCGGGGCAGCCTCCGGTGAGGTTCTCTCAGTATGGAGGGTATGTGACGGTGGATAAAATAGCAGGACGTGCCTTTTATTATTACTTTGTTGAAGCTCAGCATTCTGACAAGGATTCTTTGCCTCTTCTTCTTTGGCTCAATGGAGGGCCTGGTTGTTCATCCCTTGCCTATGGAGCAATGCAGGAGCTTGGACCCTTCAGAGTACACAGCGATGGCAAAACGCTCTTCAAAATCAGATACCCATGGAACTATGCTGCAAATGTTTTGTTTCTGGAGTCGCCAGCGGGGGTGGGATTTTCATACTCAAACAGTTCATCAGATTATGATAAGAACGGGGATAGAAGAACAGCAGCAGATAACTACGTGTTCTTGTTGAACTGGTTGGAGAGATTTCCTGAGTATAAGAACAGGGATTTCTACGTTTCTGGGGAAAGCTATGCTGGTCACTATGTGCCTCAACTTGCTCACACTATTCTCTTCCATAACACTAAAGCTAACAGGACCATCGTCAACCTCAAAGGAATCATGATAGGGAACGCAGTGATCAACGAGGAAACAGACCAAAGAGGAATGTACGATTACTTTGGGAGCCATGCATTAATCTCAGAAGAAGCAGCTTATGCCATCAACAACTTCTGCAATTTCTCTGCAAATGCTAACAACCAGACCAAGGAGTGCAATGCAGCAATTGATGAAGTTGACAAGGATACTGAATTCCTTGATATCTACAACATCTATGCTCCTGTGTGCAAGAATTCCAATCTCACTGCCTCCCCCGACAAGGCCTCTCCTATCCTTCATCCTTGTAGCGAGTATTATGTAACAGCTTATCTAAATAGGGAAGATGTTCAAGAAGCTCTTCATGCCAATGTCACCAAACTCAAATTTAACTGGGCACCATGCAGCGATGTCATCACAAGTTGGGCTGATAGTCCTACAACTATCATTCCCCTTTTACAAGAATTTCTCAATAACGGACTCAGGGTTTGGATTTTCAGTGGTGACATAGATGGGAGAGTGCCTGTGACTTCAACACTACAATCTATTAAAAAGATGAAGTTAGAGGTCACAACTACATGGCATCCTTGGTTCCTTAATGGAGAGGTTGGTGGTTACACAAAAGTACACCAGGGAAACCTAACATTTGCTACGGTGAGGGACGCAGGACATCAGGTGCCGAGCTACCAGCAAGCCAGAGCCTTCTCTTTGATCAAACACTTCTTAGATGGCACGCCTCTTCCTGATACAACAAGATATTAG 1509 0.4407 MGKERHCWFLLLLQSFLMLSLFVGGIHGSNQVQALKNLQKSKFRGLNSEIDKNPFDAEEIALDAHHRVYSQEGLKEKDRIVRLPGQPPVRFSQYGGYVTVDKIAGRAFYYYFVEAQHSDKDSLPLLLWLNGGPGCSSLAYGAMQELGPFRVHSDGKTLFKIRYPWNYAANVLFLESPAGVGFSYSNSSSDYDKNGDRRTAADNYVFLLNWLERFPEYKNRDFYVSGESYAGHYVPQLAHTILFHNTKANRTIVNLKGIMIGNAVINEETDQRGMYDYFGSHALISEEAAYAINNFCNFSANANNQTKECNAAIDEVDKDTEFLDIYNIYAPVCKNSNLTASPDKASPILHPCSEYYVTAYLNREDVQEALHANVTKLKFNWAPCSDVITSWADSPTTIIPLLQEFLNNGLRVWIFSGDIDGRVPVTSTLQSIKKMKLEVTTTWHPWFLNGEVGGYTKVHQGNLTFATVRDAGHQVPSYQQARAFSLIKHFLDGTPLPDTTRY 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1944 502 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
Glsi04g1944 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 184 IPR001563 GO:0004185|GO:0006508
Glsi04g1944 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 173 IPR001563 GO:0004185|GO:0006508
Glsi04g1944 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Glsi04g1944 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Glsi04g1944 502 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 81 480 IPR001563 GO:0004185|GO:0006508
Glsi04g1944 502 FunFam Carboxypeptidase 398 493 - -
Glsi04g1944 502 Gene3D - 352 389 - -
Glsi04g1944 502 Gene3D alpha/beta hydrolase 74 335 IPR029058 -
Glsi04g1944 502 Pfam Serine carboxypeptidase 85 493 IPR001563 GO:0004185|GO:0006508
Glsi04g1944 502 FunFam Carboxypeptidase 74 335 - -
Glsi04g1944 502 SUPERFAMILY alpha/beta-Hydrolases 76 497 IPR029058 -
Glsi04g1944 502 Gene3D - 398 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1944 Glsi-ChrGlsi04 69180104 69188354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1944 360 496 Calmodulin-binding Proteins AT2G22960 30.657 1.95e-16 75.9