Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1932 ATGAAGAGACATTTGGATCAACTGGGAATTCCCGGATGCTTATTTGCTCTTATCAGGGTTCATGATGGCTTTACCAAAGGCGAGTTTGACTTTGACATGAAAATTGATACAATTGGGAGCTGCGACCAACTTTCATTCAAAGTAGAGAAAGAAAATATGGATGATGGAGATATGGAGCTTTCGGATAACGATCTGTTGCCAAATCAGGAATCATCTAGCAATTTTCAGGTTTCAACATCTGTGAACGGAATTCATGAGTTGTTGAGGAACACCAGAACGTGCACACACACTCATACTTGCAACCCTCCTGGCCCAGATGCCGCACATACACATACATGCTATCACACTCACGCCCATGTTTTTGCATCAGGAGAAGATGATCTCCCAGATGATAAGGAGCATACCAACTCCACACCAAGAAGGCCTTTGGGAAACAGAGAAGCAGTTCGAAAGTACAGGGAGAAGAAGAAGGCACACACAGCTTATTTGGAGGAGGAAGTTAAGAAATTGCGTCTGCAGAATCAGCAACTAGTCAGGAAAATGCAGGGGCTGGCACTTCTGGAGGCTGAGTTTTTGAGGTTGAGGAGCATTTTTGTAGACCTTAAGAGCAAAATTGACAATGAGTTGGTTGATTTCCCTTATAAAAAGCAGTGTATCTCTTCTACTGCTTTCAAAGAAGGGGATGCTGGTATGCTTTCCACTGGAAGGGCAATTGGCCTCCAGTGTCAGATCAATTTGCCATGCTTCCATCCAGATGCAGGATCATCATCTCTGGTTGCTATATGCGGAAATGGTAAATTAATGGCTCCATGGGAAGGAAACTGTCAACCTGCCATTGTAGATTGTCAAGTAAACGTAGATAGGAAGGCAAGTACTGAAGAAGAAACTGTGGAAGCAGTGGATGACTAG 909 0.4367 MKRHLDQLGIPGCLFALIRVHDGFTKGEFDFDMKIDTIGSCDQLSFKVEKENMDDGDMELSDNDLLPNQESSSNFQVSTSVNGIHELLRNTRTCTHTHTCNPPGPDAAHTHTCYHTHAHVFASGEDDLPDDKEHTNSTPRRPLGNREAVRKYREKKKAHTAYLEEEVKKLRLQNQQLVRKMQGLALLEAEFLRLRSIFVDLKSKIDNELVDFPYKKQCISSTAFKEGDAGMLSTGRAIGLQCQINLPCFHPDAGSSSLVAICGNGKLMAPWEGNCQPAIVDCQVNVDRKASTEEETVEAVDD 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1932 302 PANTHER CCAAT/ENHANCER BINDING PROTEIN 50 209 IPR031106 GO:0003700|GO:0006351
Glsi04g1932 302 SMART brlzneu 133 200 IPR004827 GO:0003700|GO:0006355
Glsi04g1932 302 Coils Coil 160 180 - -
Glsi04g1932 302 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 140 201 IPR004827 GO:0003700|GO:0006355
Glsi04g1932 302 MobiDBLite consensus disorder prediction 124 145 - -
Glsi04g1932 302 SUPERFAMILY Leucine zipper domain 140 184 IPR046347 GO:0003700|GO:0006355
Glsi04g1932 302 Gene3D - 128 202 - -
Glsi04g1932 302 Pfam Basic region leucine zipper 139 189 IPR004827 GO:0003700|GO:0006355
Glsi04g1932 302 CDD bZIP 140 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1932 Glsi-ChrGlsi04 69005282 69006727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1932 53 224 bZIP Transcription Factor Family AT2G16770 46.286 1.31e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi04g1932 bZIP_2 3.9e-14 CL0018