Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1924 ATGGCCAAGAAGAAGAGCTGGTTTAGTCTGGTGAAGAGGCTTTTTATATGGGACACACAGTCCAAACAAGAGAAGAATGGAAGAAGAAGGAAATGGATATTTGGGAGGCTGAAGATAAAGAGATTGCCTTCAATTACAGCCCCACCACCACCATCAATAGAATCAACCCAAAGTGGGGCAGAGGAAGAGCAGAGCAAGCATGCTTTAACAGTGCCTACTGCCTCAGCTGCTTCTGCTGCCGAAACTGCCCATCAATGTCAGGAAGAAACTGAAGAACTTGAACTTTTTAAGTGTAGGATCAGAGACTGTGCAGCCATCAAAATTCAAACAGCATTTCGGGGTTACCTAGCAAAGAAGGCTTTGAGGGCATTGAAGGGAATAGTGAAGCTTCAAGCTATTATTCGTGGCAGAGCTGTAAGACGCCAAGCAATGAACACTCTCAAGTGCTTGCAGTCCATTGTGGATATCCAGTCACAGGTCTGTGCTAGAAGACTCCAAATGGTTAAAGGAAGATCGGATTATGATGAAAACCAAGAGATTCCAAGCTCAAGAGACAAGATAATAAGGATGGACTCAAACAGTGAAAGAAGGAAGGATGAAAGCATTTTGTTGAAGGAAGAGACAGATGCCTCTTTCAGGAGTAAGAAAGAAGTTCCGGTTAAGAGAGAGTGTGTCAAAGAATACTCATTTAACCATCGAATGGATTCAAACAGTGAAAGAAGGTGGGATGACAGTATTTTGTTGAAGGAAGAGACAGATACCTCTTACACGATCAAGAAAGAAGGTACAGTTAAGAGAGAAGGAATCAAAGAATACTCGTTTAACCATCGAAGATCAGCCGAATCAGAACGAAATAAGTTGAATGGAAGATGGAGGTATTGGTTGGAGCAGTGGGTAGATACCCAAATTTCTAAAAGCAAGGAACTTGAAGATTTAGATTCAATCTTCAGCTCACATGGCAGAACTGGGGAGGAATATGGAGGAGGAAGACAGCTAAAGCTAAGAACTACTCAGAGACAAAATCAAGTTGAAGGATCATTCTATTCTCCAAAATTTTCTCCCAGAAAACCCTTTTCTCACAGAAGGCAAGGTTCACTGGGAGATGATCATGACCATTCTATTTCAAGCTCTTCTGTGATTCCTACTTACATGGCAGCAACAGAATCAGCGAGAGCAAAAGCAAGATCACCAAGCTCCCCAAAACTAAGGACAGGGAATTTGGATTTAACCAACTTTGGTAATAGCAATTCTCCATGCAAGAAAAAGCTATCTCTTGAATCTTCCATTAACAGTGAAGTGCAGCAGAGATCTCCAAGCTTGAAGGGCATTTCAGGGCCTGTAAAATCAAGCAGGATCAAAATGAAGGACCTCAGCGTTAATTCAGATGGCTCGTTGCCGAATTGGGATCAACAATGTGCCTTCAAACGAGAAATTTTTAAGTAG 1443 0.42 MAKKKSWFSLVKRLFIWDTQSKQEKNGRRRKWIFGRLKIKRLPSITAPPPPSIESTQSGAEEEQSKHALTVPTASAASAAETAHQCQEETEELELFKCRIRDCAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMNTLKCLQSIVDIQSQVCARRLQMVKGRSDYDENQEIPSSRDKIIRMDSNSERRKDESILLKEETDASFRSKKEVPVKRECVKEYSFNHRMDSNSERRWDDSILLKEETDTSYTIKKEGTVKREGIKEYSFNHRRSAESERNKLNGRWRYWLEQWVDTQISKSKELEDLDSIFSSHGRTGEEYGGGRQLKLRTTQRQNQVEGSFYSPKFSPRKPFSHRRQGSLGDDHDHSISSSSVIPTYMAATESARAKARSPSSPKLRTGNLDLTNFGNSNSPCKKKLSLESSINSEVQQRSPSLKGISGPVKSSRIKMKDLSVNSDGSLPNWDQQCAFKREIFK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1924 480 PANTHER IQ-DOMAIN 5-RELATED 241 430 - -
Glsi04g1924 480 MobiDBLite consensus disorder prediction 43 74 - -
Glsi04g1924 480 MobiDBLite consensus disorder prediction 399 413 - -
Glsi04g1924 480 MobiDBLite consensus disorder prediction 333 348 - -
Glsi04g1924 480 ProSiteProfiles IQ motif profile. 101 129 IPR000048 GO:0005515
Glsi04g1924 480 ProSiteProfiles IQ motif profile. 125 152 IPR000048 GO:0005515
Glsi04g1924 480 MobiDBLite consensus disorder prediction 51 74 - -
Glsi04g1924 480 Gene3D - 102 171 - -
Glsi04g1924 480 MobiDBLite consensus disorder prediction 370 384 - -
Glsi04g1924 480 MobiDBLite consensus disorder prediction 318 413 - -
Glsi04g1924 480 Pfam IQ calmodulin-binding motif 103 122 IPR000048 GO:0005515
Glsi04g1924 480 Pfam Protein of unknown function (DUF4005) 354 438 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1924 Glsi-ChrGlsi04 68836585 68842105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1924 1 475 IQD Protein Family AT5G13460 41.715 4.54e-102 311